Gene Pcal_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1518 
Symbol 
ID4908471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1417779 
End bp1418699 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID640125267 
Producttransport system permease protein 
Protein accessionYP_001056403 
Protein GI126460125 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.31091e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGAAGGCCA TATACCTCCT CATAATCCCA CTCCTCTTCC TGGAACTAGC CTGGGGACCC 
GCCGGCTTTG ACCCCGCCAT AGTCGAGGCG GTTAGACTGC CCCGCGCCCT CGGGGCCGTG
GCCGCAGGGG CCGCCCTCGC CATATCGGGC CACCTGCTCC AGACCGCCCT CCGCAACCCC
CTCGCCGACC CCTACCTCCT AGGGGTCAGC CAGACCGCCC TCTTCACAGC CCTCCTCTCC
TACGTCCTCT GGCGCCTCTT CTCCGCGCCT TACCTGGGCT ACCTCGCTGG GTCGCTTCTC
GGCGCCGCGG CCGCCACCGC CGTCCTCCTC TACGCCGCGA GGAGGGCCCC CCTCACCGTC
GTAGTGCTCT TCGGAGTACT CCTCGCCTTC GCCGCCTCCT CGGCCACACA GCTCCTCCTC
CTCGCCCTGC CCCCAGAGGA GCTGGGCTAC ATCTACCTGT CGCTGCAGGG AACCTTCGCC
GCATATCCCC CCGGCCCCGT GGGCTACGCC GCGGCTGCCG CCGTCGCCGC AATATACGCC
GCAGCATGGG CCAGGGCTAG GCGCATAGCG GCCTACATCC ACGGCGAAGA GGCGGCTAAG
GGCCTCGGCG TGGACGTGGA GAAGACAAAC CTCCTCATCG CCGCCGCAGG CGCCGCGGCG
GCGGGCGTTG CGACGGCTAC GGTGGGGCCT GTGGGGTTTA TCGGTCTCTT GGCGCCGCAC
ATGGCCAAGT GGGCGGAGAA GAGCGTCCGC TTTGACAAAA CTCTCCACGC CGCCGCGGCC
ATGGGCGTCG CCCTCGCCCT AGCCGCAGAC AACGCCATAC GCCTCCTCCT GCCCCGCGAC
GTCCCAGCCA CAGTGGTTCT GTCGATCGTC GGAGCCCCGG CCGCCGCCTG GCTTCTGCTG
AAGTATGTAC GTGGCCTTTG A
 
Protein sequence
MKAIYLLIIP LLFLELAWGP AGFDPAIVEA VRLPRALGAV AAGAALAISG HLLQTALRNP 
LADPYLLGVS QTALFTALLS YVLWRLFSAP YLGYLAGSLL GAAAATAVLL YAARRAPLTV
VVLFGVLLAF AASSATQLLL LALPPEELGY IYLSLQGTFA AYPPGPVGYA AAAAVAAIYA
AAWARARRIA AYIHGEEAAK GLGVDVEKTN LLIAAAGAAA AGVATATVGP VGFIGLLAPH
MAKWAEKSVR FDKTLHAAAA MGVALALAAD NAIRLLLPRD VPATVVLSIV GAPAAAWLLL
KYVRGL