Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1518 |
Symbol | |
ID | 4908471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1417779 |
End bp | 1418699 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640125267 |
Product | transport system permease protein |
Protein accession | YP_001056403 |
Protein GI | 126460125 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000431091 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGAAGGCCA TATACCTCCT CATAATCCCA CTCCTCTTCC TGGAACTAGC CTGGGGACCC GCCGGCTTTG ACCCCGCCAT AGTCGAGGCG GTTAGACTGC CCCGCGCCCT CGGGGCCGTG GCCGCAGGGG CCGCCCTCGC CATATCGGGC CACCTGCTCC AGACCGCCCT CCGCAACCCC CTCGCCGACC CCTACCTCCT AGGGGTCAGC CAGACCGCCC TCTTCACAGC CCTCCTCTCC TACGTCCTCT GGCGCCTCTT CTCCGCGCCT TACCTGGGCT ACCTCGCTGG GTCGCTTCTC GGCGCCGCGG CCGCCACCGC CGTCCTCCTC TACGCCGCGA GGAGGGCCCC CCTCACCGTC GTAGTGCTCT TCGGAGTACT CCTCGCCTTC GCCGCCTCCT CGGCCACACA GCTCCTCCTC CTCGCCCTGC CCCCAGAGGA GCTGGGCTAC ATCTACCTGT CGCTGCAGGG AACCTTCGCC GCATATCCCC CCGGCCCCGT GGGCTACGCC GCGGCTGCCG CCGTCGCCGC AATATACGCC GCAGCATGGG CCAGGGCTAG GCGCATAGCG GCCTACATCC ACGGCGAAGA GGCGGCTAAG GGCCTCGGCG TGGACGTGGA GAAGACAAAC CTCCTCATCG CCGCCGCAGG CGCCGCGGCG GCGGGCGTTG CGACGGCTAC GGTGGGGCCT GTGGGGTTTA TCGGTCTCTT GGCGCCGCAC ATGGCCAAGT GGGCGGAGAA GAGCGTCCGC TTTGACAAAA CTCTCCACGC CGCCGCGGCC ATGGGCGTCG CCCTCGCCCT AGCCGCAGAC AACGCCATAC GCCTCCTCCT GCCCCGCGAC GTCCCAGCCA CAGTGGTTCT GTCGATCGTC GGAGCCCCGG CCGCCGCCTG GCTTCTGCTG AAGTATGTAC GTGGCCTTTG A
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Protein sequence | MKAIYLLIIP LLFLELAWGP AGFDPAIVEA VRLPRALGAV AAGAALAISG HLLQTALRNP LADPYLLGVS QTALFTALLS YVLWRLFSAP YLGYLAGSLL GAAAATAVLL YAARRAPLTV VVLFGVLLAF AASSATQLLL LALPPEELGY IYLSLQGTFA AYPPGPVGYA AAAAVAAIYA AAWARARRIA AYIHGEEAAK GLGVDVEKTN LLIAAAGAAA AGVATATVGP VGFIGLLAPH MAKWAEKSVR FDKTLHAAAA MGVALALAAD NAIRLLLPRD VPATVVLSIV GAPAAAWLLL KYVRGL
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