Gene Pcal_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1516 
Symbol 
ID4908320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1416516 
End bp1417103 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content53% 
IMG OID640125265 
Producthypothetical protein 
Protein accessionYP_001056401 
Protein GI126460123 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.03236e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
TTGAAGACTT TTTTATCTCT ACGCGTGTTA GCTATTGTGA ACAAGGAGGA GTTCTTAGAC 
CTACTAGAGA AAGACAAAGA GTTTCGCTAT GCTGTAGCTG GCAAGCTGGG GATACTAGAA
CTTTTAAGGC GCATGGACGC AGTAGAAAGG GAACTTAAGA GACAGAGAAA GGTGCTAATA
ACATTAGTGA AAGAGGTGAG GGATCTAAAG GTGGCCGTGG GATCTTTGGG CAGGAGGCTC
GGCGTTGACG TCCGGGCGTT GGTCGACGAG TTGTTGAAGA GGCTGGGGGT CGGGGAGTAC
GTGGTGGAGA AGTTTAGGTT TGAGGATAGG GAGGGGAGGT ATGGGCCGAG GGGCGTGGTG
TACGAGGTAG ACCTCTACGT GTCTAACGAC AAGACGTTTC TCGTAGAGTT GAAGAGCCTC
GTGGAGCCCG AGGATGTGGA CCGCTTCTAC TTAGTGGCAG ACGCCGTGGA GAGAATACTC
GGAAGGCGCG CAGAGGGCAA AATAATCGTG GGAGTGCACG CGGCTAGGGA GGCCCTAGAG
AGGGCTGAAA AACTCGGCGT AACTCTCCTC TACGGCGATT TGGTCTAG
 
Protein sequence
MKTFLSLRVL AIVNKEEFLD LLEKDKEFRY AVAGKLGILE LLRRMDAVER ELKRQRKVLI 
TLVKEVRDLK VAVGSLGRRL GVDVRALVDE LLKRLGVGEY VVEKFRFEDR EGRYGPRGVV
YEVDLYVSND KTFLVELKSL VEPEDVDRFY LVADAVERIL GRRAEGKIIV GVHAAREALE
RAEKLGVTLL YGDLV