Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1439 |
Symbol | |
ID | 4909350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1345917 |
End bp | 1347395 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640125189 |
Product | hypothetical protein |
Protein accession | YP_001056325 |
Protein GI | 126460047 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.174659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCATG AGGCGGCCCA ACATGGAGCC GCGGCGTTTA AGATGGGGGA TACCTCCAAC ATCAAGCCTT TTAAAGCCAA GGAGGACCAG GTCAAGGTTC TTCACTCCAG GGTGGGTCTT GAGCTTCCTA AGGACCCCCT GGAGCACATA CGGCGGCGGC TGAGGGAGGA GGTTTCACGG AACCGGAACG TGAAAATGGC CATGGAGGTG TGCGTCCACT GCGGCATATG CCTAGACAAC TGCCCCACAT ATGTCCAGAC TAAGGACATC TTCAACTCCC CCGTGGGCAG GGCGGAGCTC ATTAGGTCTG TAATTAAGGC CGAGTCCCTG AGCGGGAAGC TGTTCGGCAA AGCCGTGGGG GCGGTGAAGC TCACGGAGGA GCAGTTGGAG AAGATATACA CGTACTACTA CCAGTGCCTG GAGTGTAGAA AGTGCGCCTA CTCCTGCCCC TTCGGCATAG ATCAGGCGGA CATCACTAGG CTTGTTAGAG AGGTCATGTA CGAGGCCGGC ATAATCTCGA AGTACATTGC CACAGTCATT GACGCGGTGG AGCGCACGGG CACAAACTTG GGCATGAAGC CTATGGCGGT TATAAAGTCC ATAACCTTTG CCGCGGGGGA GATCAAGGAG GAGAAGGGCG TCGAGGTGGA GTACTTCATA TACCGCGACG ACCAGAACAA GCTGGTTAAG TACAAGGCGG ATCAGCCGGT CAAGGAGGTC CAGCCCGGCG ACCCCGATTG GCCGGAGGCC TTGCTCATTC CGCCCTCGGC CGACTTCTTT ACAAACATGG AGACTCTCAA GGGGTACATG CTCTTCCTCC ACCTAATGGG GATTAAGTAC GCCTTTAGCA CAGAGATGGC GGAGCTGGCA AACTTCGGCC TATTTGCCTC AGAGCGCCAC ATGAAGTTCA TAGGCCAGAA GGCCGTCAAC GCCGCGCTCA GGCTCAAGGT GAAGTACGTA ATTGCGGGGG AGTGCGGCCA CGGGTGGCGC GCCTTTAAGA ACTACACTGG GCCAGAGCTG GAGAAACACG GCATAAAGAC TATGCACGTC TTCCACCTAG TGGTAGACGC CATTAAAAAC GGCAAACTGA AGCTGGACCC CTCCCGCAAC GGCGACGTCG TCTACACCTT CCAAGACTCC TGCAACTACG CCCGCGGCGG CGACTTGACG GAGGAGCCAC GCTTCATAAT TCGGCACGTG GTTAAGAACT ACGTGGAGAG CCCCAACAAC AGAGAGAAGA CGTGGTGCTG CGGCGGCGGA GGGGGCCTGC TGACCGACGA GCTTCTGCCG CTGAGGATTC AATACGCCAA GAACTGGTAC GAAGACGCCT TGAAGGTCAA CGCAAACCAC GTGGTCAGGG CCTGCGCCAT ATGCAAAGCC CAGCTGAGCC ACACAATCCC CCACTTAAAC AAGGAGTACG GCAAAAACAT AACCTACTCC GGGCTAATGG ACCTGGTATA CAAGGCCATA GTCGTTTAA
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Protein sequence | MAHEAAQHGA AAFKMGDTSN IKPFKAKEDQ VKVLHSRVGL ELPKDPLEHI RRRLREEVSR NRNVKMAMEV CVHCGICLDN CPTYVQTKDI FNSPVGRAEL IRSVIKAESL SGKLFGKAVG AVKLTEEQLE KIYTYYYQCL ECRKCAYSCP FGIDQADITR LVREVMYEAG IISKYIATVI DAVERTGTNL GMKPMAVIKS ITFAAGEIKE EKGVEVEYFI YRDDQNKLVK YKADQPVKEV QPGDPDWPEA LLIPPSADFF TNMETLKGYM LFLHLMGIKY AFSTEMAELA NFGLFASERH MKFIGQKAVN AALRLKVKYV IAGECGHGWR AFKNYTGPEL EKHGIKTMHV FHLVVDAIKN GKLKLDPSRN GDVVYTFQDS CNYARGGDLT EEPRFIIRHV VKNYVESPNN REKTWCCGGG GGLLTDELLP LRIQYAKNWY EDALKVNANH VVRACAICKA QLSHTIPHLN KEYGKNITYS GLMDLVYKAI VV
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