| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1438 |
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| Symbol | |
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| ID | 4908322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1344663 |
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| End bp | 1345799 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125188 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001056324 |
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| Protein GI | 126460046 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.111264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAGGG TGGTAATAGT GGGAGGGGGA GTCGGCGGCG CGTTTACTGC GAATAAGTTG
GCAACTAAGG CGTTTGCAAA GGTGAAGAAG GGGGAGCTGG AGGTCGTAGT TGTAGAGCCG
GAGGAGAACG TGGTCTACCA GCCCGGGTTC CTATACGTCC CGTTTAAGGA GTTGCCCAGC
GAAGTGATGT TTAGGCCCGT GCGGAAGGTG CTACACCCAC TTGTGAACTT GGTGAAAAAG
CCGGCCACCA AAATAGACGT GAAAAACCGC AAGGTGGTTC TGGGGGATGG GTCTGAGATT
CAGTACGACT ACCTCGTCTT GGCCACGGGC GCGGTGGTTA AGACGGACCA CTTTCCCGGG
TTTAAAAAGG TGTGGCACAC TTTCTGGACT TACGAGGGGG CCAAGGCGCT GAGGGAAGCC
CTCTCTAAAT TTGCTAAGGG GACCTTGGTA TTCTCCGTTG CCTCGACGCC TTTTAAGTGC
CCCGTTGCCC CCTACGAGTT CCTCTTCTAC TTCGACGACG TGTTGATGAA GACTGGGCGG
AAGAAGGACG TCAAAATAGT GTTTACCACG GTGGCGCCGC ACCTGCATGC GCAGCCCAAT
GTGAACAAGT TCTTGGAGGA GGAGTTTAGG AATAGGGGGA TTGAGTATAG GACCAAGTTC
GAGGTAAAGG AGGTGAGGGA GGGGGAGGTG GTGGGCCCCG AGACGTTGAA GGGCGACTTA
ATTATCGTGG TGCCTAAGCA CACCGCGGCA GAGGTGGCCT TTAACTCGGG ACTGGTGGAC
CAGGGGGGCT GGGTCCCCGT GGATAAGTAC ACTCTCCAGA TCGCCGGGGG CAACGGAGTG
GAGTACGCGA TAGGCGATAC CACCAATTTG GCCGTGCCTA AGGCTGGCAG CGTGGCGCAC
TTCCAGTCCG AGGTTGTGGC TGACAGGATA TATGAGGATA TGGAGTTCGG CCACGCAGAC
TCTGTATACA ACGGCAGGGT CATATGCTTC ATTTTGACGG GGACAGAGGA GGCTACGCAG
GTGAGCTGGA ACTACGACGG CCCCGCCCTC TACCCCGTGC CAAGCAATAA GTTCATGATG
AGGCTAAAAG ATTTGACTAA TTTCTCCATA TGGAGCGCGG TTAGGTGTGG GCTATGA
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| Protein sequence | MRRVVIVGGG VGGAFTANKL ATKAFAKVKK GELEVVVVEP EENVVYQPGF LYVPFKELPS
EVMFRPVRKV LHPLVNLVKK PATKIDVKNR KVVLGDGSEI QYDYLVLATG AVVKTDHFPG
FKKVWHTFWT YEGAKALREA LSKFAKGTLV FSVASTPFKC PVAPYEFLFY FDDVLMKTGR
KKDVKIVFTT VAPHLHAQPN VNKFLEEEFR NRGIEYRTKF EVKEVREGEV VGPETLKGDL
IIVVPKHTAA EVAFNSGLVD QGGWVPVDKY TLQIAGGNGV EYAIGDTTNL AVPKAGSVAH
FQSEVVADRI YEDMEFGHAD SVYNGRVICF ILTGTEEATQ VSWNYDGPAL YPVPSNKFMM
RLKDLTNFSI WSAVRCGL
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