| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1418 |
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| Symbol | |
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| ID | 4909225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1327885 |
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| End bp | 1329744 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125168 |
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| Product | hypothetical protein |
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| Protein accession | YP_001056304 |
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| Protein GI | 126460026 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00970079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGATTGGG GAGAAGCGTT CAGCAACGAG GCGTTGGAGG AGCTCCGCGG GAGACTTGAA
CGCTGGGAGG AGCTGTGTAT GCAACTCCGT GGGCTCTACT ACCGCTACAT TGACCTGGCC
GCCTTCCGCT CGGAGAAGTG CTTCTATCCC GGGCGGAGGT GTAAGAGGCC GTGGGGGCGG
GAGTACGATG TGGGCGACCT CACGTTCATG TGGCTACATA TCGCAAACAC GGCGCCGCTG
TGCGGCGATC TCATCAAGGC ACTGGCAGAT GTGGAGGAGA GGTTTAGACA GATGGGCGTG
GAGAGCCTTG AGAAACACGG CGGCGTAGAG GAAAAGTCCA TGGCTGTGAC AGAAATCGTA
CACTGGCGCA TAAAAAAGCC GGTATATGCA ACTGTGGCGT TGTGGGAGAA GAGGCTGTAC
GTCTTCTACG ACGGCATGTC AATTGGCGAA GGGCTAAGGG GAGATGAGCT GGAGAAACTG
ATAAGGGAGG CCATGCAAGT GGGCATCGCC GCCGAAGTAT ACGACGTAGA CGACGAGTAT
AAACGCCTAC TGCTTGAGGT GCCACTGCCA AGGCCCGTGT CGGGATTGCT AGGCAGGTGG
AATAGGGCGC CAGTGGCACT GTTTAGGAAT TTGGGCTGGT TGCTGAGCGA CGACTGGAGA
CAGCATCTTG GACACACTGC TGGCAATCCC GGCCAGGTCG CGGTGAGGCT GTTTGACTGG
ATAGCCCTGG CCAAGTACAC GATGGAGCGG AGGATCGCGC CAAGGGCGCC GCTGGTATTC
AAGCTGTCTA TCTATCTGAT CACGAGGAGT AAGAGGGGCA AAAACCCTAT CGTCGAAGTG
CGCCCCGTCG GCACAGCTAC GGAGACCATC TCCACAGTAT ACGACTGGTT CGGGATAACG
CTGGGTAAGA CTGAGGAGGT GTTGGCGAGG GGCTACTTAG TGCTTAAGGC GTTGAAGGAA
GAGGCCTTCA AGCGAGACGG CAAGATGTAC GTCGTCAACG ACGTAGGGGC GTGGATTGCC
TTTAGCAACG CAGTGGCTAC TCTGGTGTTG GGAGACGGCT ACGCCATGCC GGCGGAGTTT
AGAATTGTGG CTAAGGCCTC GCCCAGAGAG ACGTTGGAGG GAGGTACGCA CATAAAAGAG
TTGGCTGAGG CTCTGGGCGG CGTGGTGGCT GGGAGAGAGG TAAAGCTCCA GAGCTGGCAT
ATGCGCCTGT TGTTGCTAAC TCCGCCTACG CCCGCCTTTG AAAAGACGGC AGAACTGTAC
GAGGTACTTG TCAACTACCC GGCGGCCGCC GTTGTCGAAA TAAACGGCGC TACATATTTG
CTCACTCACA ACGGCGGTGG CGAGTTTGTA ATTGGAAAAG GGAGAGCTAC AGAGCTGTAC
GAGGCAGTAA ACAGGCTCGG CATACAGACG AGATTAAAGG GGCAATTGCT AGTGCTGACT
TACGCCCAGC TGGAGGAACT GGCGAGGCGC GGCTTTGCCG TCAAATTCCT CAACGACATG
GAGAAAGACG CGGTGAGAGA AGTTAAGGCT GTGACGCCAG CGTCTGACCC AAACGCCGTT
AGGCGCGTGT TAGAGGAGGT GGCCAAGATG GCGAGAATAG TAGTGGCTAC AGACAGAGGC
CGGCTCTACA TAAGGATAAT CCCCCACGAC AAGTCCAAGG CGGAGGAAAT AGCGGCCAAG
CTGAGAGCCG TGGGAATAAG AGCCACGATA TTACGCAAGA AGAGAGAGGT AAGAATACAC
GAACAAAAGT CGATAGAAAT AATCCGTAGG ATAGCCCCCC ACTTTTTCCA CCCATTTACA
TTTCTACAAT CACACTACTG CAAAATTAAG GCACCTATAT ATGAGAGTTT TGATATATGA
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| Protein sequence | MDWGEAFSNE ALEELRGRLE RWEELCMQLR GLYYRYIDLA AFRSEKCFYP GRRCKRPWGR
EYDVGDLTFM WLHIANTAPL CGDLIKALAD VEERFRQMGV ESLEKHGGVE EKSMAVTEIV
HWRIKKPVYA TVALWEKRLY VFYDGMSIGE GLRGDELEKL IREAMQVGIA AEVYDVDDEY
KRLLLEVPLP RPVSGLLGRW NRAPVALFRN LGWLLSDDWR QHLGHTAGNP GQVAVRLFDW
IALAKYTMER RIAPRAPLVF KLSIYLITRS KRGKNPIVEV RPVGTATETI STVYDWFGIT
LGKTEEVLAR GYLVLKALKE EAFKRDGKMY VVNDVGAWIA FSNAVATLVL GDGYAMPAEF
RIVAKASPRE TLEGGTHIKE LAEALGGVVA GREVKLQSWH MRLLLLTPPT PAFEKTAELY
EVLVNYPAAA VVEINGATYL LTHNGGGEFV IGKGRATELY EAVNRLGIQT RLKGQLLVLT
YAQLEELARR GFAVKFLNDM EKDAVREVKA VTPASDPNAV RRVLEEVAKM ARIVVATDRG
RLYIRIIPHD KSKAEEIAAK LRAVGIRATI LRKKREVRIH EQKSIEIIRR IAPHFFHPFT
FLQSHYCKIK APIYESFDI
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