| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1403 |
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| Symbol | |
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| ID | 4909131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1316603 |
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| End bp | 1317778 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640125153 |
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| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
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| Protein accession | YP_001056289 |
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| Protein GI | 126460011 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0133365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAGT TCAAGTTCCC CGACTTGGGC GAGGGGCTGG TGGAGGGGGA GGTGGTGAAG
TGGCACAAGC GGGAGGGCGA CTTCGTCAAA GAGGGGGAGG ACCTCGTGGA CGTCATGACT
GAGAAGGCCA CTGTGACTCT GCCCTCCCCC GCCACGGGGA GGATTGTGAA AATCTTGGCC
AAGGAGGGGG GGGTGGTGAA GGTGGGCCAG GTCTTGTGCA TAATTGAGGA GGCGGCCCCC
GGCGCCCCCG TTGAGGCTAA GGCCGAGGCG CGGCCAGAGG TTAGGGCTAT GCCCGCCGCG
AGGCGGTTGG CCAAGGAGCT TGGGTTGGAC TTGTCCAAAG TGGTGGGAAC TGGGCCGGGC
GGGGTTATCA CTGTGGAGGA CGTGAGGAGG GCCGCGGAGG CGGCGAAGCG GGAGGTCGGC
GTTGCGGAGG CGAAGCCCGC TGCGCCTGCG CCGCCGGCTG AGGAGAGGCC TGCCCAGCCT
CTGCGGGAGG AGAGGATCCC CGTGAGGGGT GTCAGGAGGG CCGTGGCCGA GAAGATGAAG
AAGTCCAAGT CTCAGATACC CCACGCCTAC CACGTGGACG AGGTGGATGT GACAGAGTTG
GTCAAGCTGA GGGAGAGGCT CAAGGCCTAC GCTGGGGATG TGAGGCTCAC CTACACGCCT
TTCTTTGTGA AAGCCGCCGT GGCCGCCTTG AAGAAGTACC CCCTCCTCAA CGCGTCTTTC
GACGAAGAGC GGGGCGAGAT AGTGGTGAAG AAGTACTTCA ACATAGGCGT CGCCGTGGAC
ACAGAGAACG GGCTCGTCGT GGTTGTGATC AAAGACGCAG ACTCTAAGTC CATACTGGAG
GTGGCAAGGG AGCTCCAGGA GAAGAGCGCG CGGGCCAGGG AGGGGAAGCT CTCCCTTGAC
GACGTGAGGG ACTCCACCTT TACCATAACC AACATAGGCG CCATCGGCGG GCTCTGGGGC
CTGGCAGTGG TGAACTACCC CGAGACCGCC ATATTGGCCA CGGGGAGAAT TGTGAAAAGG
CCCAGGGTGT ACGAGGGGCA GGTGGTGCCC AGGGACGTGA TGTACGTGGC GGTGAGCTTC
GACCACAGGG TGGTCGACGG GGGCTACGTG GCCAGGTTCA CCAACGCGTT TAAGGAGCTC
CTCGAGTCCC CCGACCTCCT GGTGCTAAAC CTATGA
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| Protein sequence | MIEFKFPDLG EGLVEGEVVK WHKREGDFVK EGEDLVDVMT EKATVTLPSP ATGRIVKILA
KEGGVVKVGQ VLCIIEEAAP GAPVEAKAEA RPEVRAMPAA RRLAKELGLD LSKVVGTGPG
GVITVEDVRR AAEAAKREVG VAEAKPAAPA PPAEERPAQP LREERIPVRG VRRAVAEKMK
KSKSQIPHAY HVDEVDVTEL VKLRERLKAY AGDVRLTYTP FFVKAAVAAL KKYPLLNASF
DEERGEIVVK KYFNIGVAVD TENGLVVVVI KDADSKSILE VARELQEKSA RAREGKLSLD
DVRDSTFTIT NIGAIGGLWG LAVVNYPETA ILATGRIVKR PRVYEGQVVP RDVMYVAVSF
DHRVVDGGYV ARFTNAFKEL LESPDLLVLN L
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