| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1119 |
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| Symbol | |
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| ID | 4908604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1052669 |
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| End bp | 1053772 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640124873 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_001056010 |
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| Protein GI | 126459732 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.920793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTATT TGAGCTTATA CAACGCCCCG ATGTACGACG TTGTAGTAGT GGGAGCAGGC
CCCGCCGGCT CCACCGCCGC CATTGTGGCG GGCAGGCTCG GCCTCAAGGC AGTGGTAGTC
GACAGACTAC AGCCGCCTAG GGAGAAGCCG TGCGGCGGCG GCCTCACGCC TAGGACACAG
CGCTTGTTAA ATGCATTGGG AGTAGAGTAC CCCGTGTATG GGCGGTGTGA CACCATAGTG
GTACAAGCCG CGGGGTATAG GTACGAGATG AGGAGAGAGC CCATATTAGT CACGAGACGG
CCCGACTTCG ACTACGCCCT CTTAAAACAG AGCGGGGTAG AGTACGTAAA AGATCAAGTG
GTTGAGGTCA GAGACAACAC CGCGGTGGGA AGAGCCGGCG AATACGCCGG AGAGGTGATC
ATTGGGGCAG ACGGCGCCAC CAGCGCCGTG GCCCGCTCCA TAGGGGTGTA CAACTACAAG
GGCCACAAAA GCCACGGCAT AGCCTACATG ACCATCGCCA GCGGCCCCCC ACGAGACATA
TGCATAATAG ACTTCGACGC AGTGATAAAC ACAGTGGGAA AAGTGGGATA CGCGTGGATC
TTCCCCCTAA AAGGCGGGGC CAACATAGGC GCTGGAACTG GGTGGGGCAA GTGGCTCGAC
TTGAGGGAGC TCGTCGCAAA ATATGCAGAA TCCGCGGGGT ATAAGCCAGG CCAAATCCTC
GGCCACCCCC TCTCCCTGGG CCACGTCGAG GGCGTGGGCA GAGGAAACGT AATACTGGCT
GGCGAAGCGG CGGGCCTCGT AGACGCCACC ACGGGGGAAG GCATATACTA CGCCGTTGCC
TCAGGCGCCT TGGCGGCGCT GGCGGCCTAC GCCGCATTGA AGATATACGG CAAGGGGAAG
TACGCGAGCC AGGTATATGA GGAGCTTGTA AAGCCGTATG TAGAAGAGGT GAAAAAGACC
AGGGTACTCT CCCGAGCCGC CAACTACTTG TCAAAGAGCA GGACTGTGGT CAAGCTGATC
GGCAGAAGGC TCCTCAAGCT CTACACAGCG GTTTACACAG GAGAAGCCAC CTACAGCCTC
CTACTAAAGC CCGTACCCAA GTAG
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| Protein sequence | MIYLSLYNAP MYDVVVVGAG PAGSTAAIVA GRLGLKAVVV DRLQPPREKP CGGGLTPRTQ
RLLNALGVEY PVYGRCDTIV VQAAGYRYEM RREPILVTRR PDFDYALLKQ SGVEYVKDQV
VEVRDNTAVG RAGEYAGEVI IGADGATSAV ARSIGVYNYK GHKSHGIAYM TIASGPPRDI
CIIDFDAVIN TVGKVGYAWI FPLKGGANIG AGTGWGKWLD LRELVAKYAE SAGYKPGQIL
GHPLSLGHVE GVGRGNVILA GEAAGLVDAT TGEGIYYAVA SGALAALAAY AALKIYGKGK
YASQVYEELV KPYVEEVKKT RVLSRAANYL SKSRTVVKLI GRRLLKLYTA VYTGEATYSL
LLKPVPK
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