| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1087 |
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| Symbol | |
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| ID | 4910091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1020590 |
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| End bp | 1023151 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640124839 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001055978 |
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| Protein GI | 126459700 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGAACG AGTTTGAGTT TGAAGAATTT GAAGAAGAAG TACAGGAGTA CGAGGGGGAG
GCCATCGAGG AGAGTAAGCT AAAGGGCGTT GTCTCAGTCA CGATCCCCCC CTCGCTGGTT
CTCGCCGTGG TCTACGACGG GGCCGAGGGA AAGGCCTTGG TGAAGTTCTA CGACCCCGTC
GGCGACGTGG TTTACTACTG GTACGACAAC ACTGGCCATA GGCCGTACCT AATCGTAAAG
ATGTCGCCGG AGGAGCTTGT GGAGAAGTTT CCAGACTTGT TAAAACACCC TGGCTTTAGC
CACATAGACG TAGAGGAGAA ATACGACGCG TTGCACGACG AGAGGATTGT TGTGACAAAG
GTCTACGCGA AGGACCCCCT CACTGTGGGA GGGGGGAAGA AGTCCTTTAG GGATATGCTT
GGCGCCACTT GGGAGTCGCG GATAAAGTAC CACCACAGCT ACCTCTTCGA CCGGGGCATA
ATCCCCGGCA TGTGGTATAG GTCCAACGGC TCTGGCCTTG TCCCAGTGGA GATATTCATA
CCCCCCGAGG TTAAGTCCTC TCTGGGCAAG GTGTTTAAGC AGGAGCACGC CAAGGTGGCC
GAGGAGTGGA TGCCCCTCTT CCAGGCGCCA ATACCCCACC TGAGGAGGGT GGCAATAGAC
GTGGAGGTCT ACACGCCGCA GGAGAACAAG ATCCCTGACC CAAAGGAGGC CCTCTACGAG
GTAATCTCCG TGGCCGTGGT GGGTAGCGAT GGGCTCAAGC GCGTCTTTGT CTTGAAGAGG
CCCGGCGCCG AGGCGGACCT CAGGTATAGG CCGGACTACG AGGTGTTTTT CTTTGACAGC
GAGTACGACC TAATTAGAGA GGTCTTGAAG GTCATTGTCC AGTACCCCGT GGTGATAACC
TTCAACGGGG ACAACTTCGA CCTCCCATAT CTCTACAACC GCGCCTTGGC CCTCGGCATA
CCCAAGGAGG AGTTGCCGAT AGCGGCTAAG CGGGACTACG TAAGCGTGGT CCCCGGAATA
CACATAGACC TCTTCAAATT TTTCGCCATC AAGGCGGTTG AGGCCTACGC CTTCGGCGGA
GTATATAGGG GGGAGAGGGG GCTCGACGGC ATCGCCTACG CCATCTTGGG CGTGGGGAAG
GTGGAGAGAC AGAAGAACGT ATCTAAGATG GGCTACTGGG AGCTCGCCGA GTACAACTAC
AGAGACGCCC TAATTACCCT CTACTTCACT CTCTACAATA ACGAGCTGGT GATGAAGCTA
ATACTCTTGA TGTCTAGAAT TGCGAAGATG CCCATTGAGG ACATCACTAG GTCGCAGGTG
TCGGCCTGGA TCCGCAACAT GTTGTACTAC GAGCACAGGA GGAGGGGCTG GCTTATACCA
AACAAGGAGG ACATACTAGC GGAGAAGGGC CAAGTCTACA CCAAGGCCAT TATCAAGGGG
AAGAAGTACG CCGGCGCCGT GGTGCTGGAC CCGCCTCTCG GCGTGTTTTT CAACGTGTAT
GTGCTAGACT TCGCCTCTCT GTACCCCTCC ATAATCAGCA AGTGGAACCT CTCCTACGAG
ACTGTCAACT GCAAGGGCGG TGGGGAGAGG CCAATCCCGG AGCTCCCCCA CACCGTGTGC
CGCGATAGGC CGGGCATGAC CAGCACCCTG GTCGGCGTCC TTAGAGACTT GAGAGTCCAC
GTGTACAAGA AGTTGGCCAA GTCGGCGCCC ACGCCCGCGG AGAGGCAGCT GTACGACGTC
GTCCAAAGCG CCATGAAGGT CTTCATAAAC GCGTCCTACG GCGTCTTCGG GGCGGAGAAC
TTCCCGCTGT ACTGCCCGCC GGTCGCCGAG TTGACCACTG CCCTCGCCAG GTACGTCATG
ACGAGCACTG TGCTAAAGGC CACGCAGCTG GGGCTAATCC CCCTGTACGG AGACACGGAC
TCCCTCTTCC TATGGGACGT CTCCGAGGAC AAGCTAAAGA AGTTGATTGA GTACACAGAG
GAGTTGGGCA TAGACATCGA GTTGGACAAG GTGTACAGGT TCGTCATGTT CAGCGGCAGG
AAGAAGAACT ACCTAGGCGT AACCGCGGAC GGAGGCGTCG TAGTAAAGGG CATTGTGGCC
AAGAAGCGCA ACGCCCCGCC GCTGGTGAAA GAGCTCGTGG AAGAGATAAT CGACCGGCTT
AAGAACGTGG CGACGGTGGA CGACATGCTC AAAATCAGGG AGGAGGTAAT AGCCATGGTG
AAGGAGACCG AGGCCAAGAT TAGGGAGAAA AAAATTACGC TAGAAAAGCT GGGGATAAAG
ATCGTGCTCA ACAAAAACCT CAACGAGTAC ACCAAAAACA AGCCGCAGCA TGTGAAGGCG
GCAGAGCAGT TGCTGAAGTA CGGGATTCAG GTGGGGCGCG GCGACGCCAT CGTGCTCATA
AAGACGAAAG ACGCCATGGG CGTAAAGCCG ATACAGCTGG CGCGCATAGA CGAAATAGAC
GAGAAGAAGT ACCTAGAGTA CATTAGCACG TCCCTAGAAC AAGTGCTAGA GGCGATGGGA
GTCTCGATGG AAGAGCTGAG AGGGGCAATG CGCCTATTCT AG
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| Protein sequence | MENEFEFEEF EEEVQEYEGE AIEESKLKGV VSVTIPPSLV LAVVYDGAEG KALVKFYDPV
GDVVYYWYDN TGHRPYLIVK MSPEELVEKF PDLLKHPGFS HIDVEEKYDA LHDERIVVTK
VYAKDPLTVG GGKKSFRDML GATWESRIKY HHSYLFDRGI IPGMWYRSNG SGLVPVEIFI
PPEVKSSLGK VFKQEHAKVA EEWMPLFQAP IPHLRRVAID VEVYTPQENK IPDPKEALYE
VISVAVVGSD GLKRVFVLKR PGAEADLRYR PDYEVFFFDS EYDLIREVLK VIVQYPVVIT
FNGDNFDLPY LYNRALALGI PKEELPIAAK RDYVSVVPGI HIDLFKFFAI KAVEAYAFGG
VYRGERGLDG IAYAILGVGK VERQKNVSKM GYWELAEYNY RDALITLYFT LYNNELVMKL
ILLMSRIAKM PIEDITRSQV SAWIRNMLYY EHRRRGWLIP NKEDILAEKG QVYTKAIIKG
KKYAGAVVLD PPLGVFFNVY VLDFASLYPS IISKWNLSYE TVNCKGGGER PIPELPHTVC
RDRPGMTSTL VGVLRDLRVH VYKKLAKSAP TPAERQLYDV VQSAMKVFIN ASYGVFGAEN
FPLYCPPVAE LTTALARYVM TSTVLKATQL GLIPLYGDTD SLFLWDVSED KLKKLIEYTE
ELGIDIELDK VYRFVMFSGR KKNYLGVTAD GGVVVKGIVA KKRNAPPLVK ELVEEIIDRL
KNVATVDDML KIREEVIAMV KETEAKIREK KITLEKLGIK IVLNKNLNEY TKNKPQHVKA
AEQLLKYGIQ VGRGDAIVLI KTKDAMGVKP IQLARIDEID EKKYLEYIST SLEQVLEAMG
VSMEELRGAM RLF
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