| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0852 |
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| Symbol | |
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| ID | 4908684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 813447 |
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| End bp | 814865 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640124601 |
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| Product | hypothetical protein |
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| Protein accession | YP_001055744 |
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| Protein GI | 126459466 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2855] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.497351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAA CTAAAATCGA CTGGAGTTCC TTGTATAAGA AGGAGGATTG GTGGGCTCTG
TGGCTTGGCC TATTTGTGTT TCTACTAGCC GCCGCCTTTT TACTAGGGTG GGCGCCTAAG
GTCAGTGTGT GGCTCGACCC AATGAAAAGC GTCTCTACCG CCAGTAAAGA TTTTGCATAT
CTAGGGGGCT GGAGCATCCT CCTCCTCTAC TTCTTTACTT TAGTAGTTTT GACTATAGCG
GCGGCGATTA TGAAATTTGA CGTGAAGGCC TACGCAGTTG GCTACACTGT TATCTTCTGG
CTGTCTTACC TCATGTGGTG GATTGGACAC AACGCATATA TAGCCGCTAC TCCCGACCAA
TACCCCAAGT TTGGCATAAA CTGGAGTCTT AGCTTGACCG GCGAAGCCGG CTACATCTTC
GCGCTTCTGC TGGGCTTGAT CATTGGCAAC GCTTTTAGAA AGCTACCAAA GCCGCTGGAG
ACAGCTGCCA GGCCTGAGTG GTATATTAAA ACCGCTATTG TCCTCCTAGG CGCAGTCATC
GGCGCCAAGT CTCTAGCTAA TCTCCAAGTC GCGGCAGAGA TTCTGACTAG GAGCCTTATA
GCAATAGTGG CCGCCTACTT GATCTACTGG CCTATTAGCT ATTGGGTCTC TAGAAAGCTA
GGCTTAGATA GACAGTGGTC CGCCGTGTTG GCCTCCGGCG TGAGTATATG CGGCGTGTCT
GCAGCTATCG CCACGGCTGG CGCAATAGGC GCGCCCGCGG TGATACCCGG CACCATAGCC
TCTATAATTG TCATATTCGC CGTAGTAGAA CTTATTATCC TCCCGTGGAT AGCTGCACAG
ATTTTGACTT GGGCTCCCCT AGCCGCTGGC GCTTGGATGG GGCTCGCCGT TAAAACCGAC
GGTGCCGCCG CCGCGTCGGG CGCAGTGGCG GACGCACTCA TATCGGTCGT GGTTCCAGAG
GCTAAGAACT GGGTTACTGC GACGGCGGTT ACAGTCAAGG TGTTTATCGA CATATGGATA
GGCTTGTGGG CTTTTATAAT GGCGCTGTGG TGGGTCACTA GAGTGGAGAG AAAGCCCGGG
GAGAAGGTGT CCGCCATAGT TATCTGGTTT AGATTCCCGA AGTTTGTAAT TGGCTACTTT
GTCACTATGC TTGCGCTTAT GGGACTGGCG TGGTTTATGC CGCTTAAACA AGCCGCAGAT
TTAGCTAACG CAATTGCTGG ACAGTCAGAC GTGTTGAGGC AGTTCTTCTT CCTCATCACC
TTCACCTCGA TTGGGCTAAC TACAAACTTT AGAAAATTTA AGGAGATTGG CGCTGGCAAG
GCGGTATTGG CATACGCCAT TTCGCTGTTG ATAATTATAG TCATTGCACT GGCGCTGTCT
ATTGCCTTCT TTGCAGGCGT GCCGCTTCCC AAATCCTAA
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| Protein sequence | MSQTKIDWSS LYKKEDWWAL WLGLFVFLLA AAFLLGWAPK VSVWLDPMKS VSTASKDFAY
LGGWSILLLY FFTLVVLTIA AAIMKFDVKA YAVGYTVIFW LSYLMWWIGH NAYIAATPDQ
YPKFGINWSL SLTGEAGYIF ALLLGLIIGN AFRKLPKPLE TAARPEWYIK TAIVLLGAVI
GAKSLANLQV AAEILTRSLI AIVAAYLIYW PISYWVSRKL GLDRQWSAVL ASGVSICGVS
AAIATAGAIG APAVIPGTIA SIIVIFAVVE LIILPWIAAQ ILTWAPLAAG AWMGLAVKTD
GAAAASGAVA DALISVVVPE AKNWVTATAV TVKVFIDIWI GLWAFIMALW WVTRVERKPG
EKVSAIVIWF RFPKFVIGYF VTMLALMGLA WFMPLKQAAD LANAIAGQSD VLRQFFFLIT
FTSIGLTTNF RKFKEIGAGK AVLAYAISLL IIIVIALALS IAFFAGVPLP KS
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