Gene Pcal_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0729 
Symbol 
ID4908560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp690554 
End bp691450 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content54% 
IMG OID640124478 
Productmanganese containing catalase 
Protein accessionYP_001055621 
Protein GI126459343 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3546] Mn-containing catalase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.23231e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTACCTAA GAATAGACCG GCTCCAAATA CAACTGCCAG CTCCAAAAGA GCCTGACCCC 
AACGCCGCGG CAGCCGTCAG CGAGTTGCTT GGGGGCAGAT TTGGGGAAAT GAACACGTTG
ATGACGTACA CTTACCAATC CTTCAACTTC CGCATGCACA AAAACCCAGC CATAAAGCCC
TTTAGAGACC TGGTCTCCAA CATAGCCACA GAGGAACTCG GTCACATCGA GCTGGTATCC
GCCGTGGTAA ACGCCCTATA TGTGGGCTCC ACAAAGCCGG CGCCCCCAGA CCAAGCCCCA
CTAAAGCCCC TAAAAGACGT GAGAAACACC TACCACGCGA TAAACACAGG CCTCGGCGCC
TTCCCCATGG ACTCCCACGG AACGCCGTGG CGCGGCGACT ACATATTCGT AAGCGGCAAC
CTAGTGCTAG ACTTCCTATA CAACTTCTTC CTAGAGGTTG GGGCACGCCT AGCCAAAATC
AGGGTATACG AGATGACAGA CAACCCAGTG GCCCGGGAAA TGATCGGCTA CCTACTGGTG
CGCGGCGGCG TACACGCCAT GGCATACGGC AAAGCCCTAG AGGCTCTGAC AGGGGTAGAA
GTGTGGAGAA TGCTACCCAT ACCCAAGATA GAGGACTCCA AATTCCCAGA AGCCGCCAAG
TACATGAAAA TGGGAGTACA CAGGACACTG TACAGATTTA GCCCAAGCGA CTACAAAGAC
ATAGAAAAAA TCTGGAAGGG AGCCCACCCA GCCGACGGCC AGCCGCTACA AGTACACGAC
GGACCTCCCG AGGGAGGAGA ATACCTAGAA CTACCAGAAG TCCCCGAGGA ATTCGCCCCC
GGCCTATACA AAGACGACTT TGAGAGAATC GCCAAGAGAC TGGGAATAAA CCTCTAA
 
Protein sequence
MYLRIDRLQI QLPAPKEPDP NAAAAVSELL GGRFGEMNTL MTYTYQSFNF RMHKNPAIKP 
FRDLVSNIAT EELGHIELVS AVVNALYVGS TKPAPPDQAP LKPLKDVRNT YHAINTGLGA
FPMDSHGTPW RGDYIFVSGN LVLDFLYNFF LEVGARLAKI RVYEMTDNPV AREMIGYLLV
RGGVHAMAYG KALEALTGVE VWRMLPIPKI EDSKFPEAAK YMKMGVHRTL YRFSPSDYKD
IEKIWKGAHP ADGQPLQVHD GPPEGGEYLE LPEVPEEFAP GLYKDDFERI AKRLGINL