Gene Pcal_0727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0727 
Symbol 
ID4908527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp687729 
End bp690107 
Gene Length2379 bp 
Protein Length792 aa 
Translation table11 
GC content66% 
IMG OID640124476 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_001055619 
Protein GI126459341 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase
[COG2608] Copper chaperone 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.26608e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGCTGGGTG TGGAGGTGAA GGTTGGGGTT AGGGTTGGGG GGCGTAGTGC CGTGGTTAAG 
GTTTTGGGGA TGCACTGTGC CACTTGTTCT CTCACTGTGC AGAGGGCTCT TCTCTCTGTG
CGGGGGGTGA GGTGGGCTGA GGCTTCTCTT GCCAGTGGCG AGGCTAGGCT TGTGGTTGAT
CCCGAGGTGT TGGATTGGGG GGAGTTGCTG AGGGCTGTGC GGGGGGTGGG GTACGACGTG
TATAGGGAGT CTGCTCACAT AGTGGCGGAC TTCCGCCCGG AGGAGGTGGA GGCTGTGGAG
AGGGCGGCGG GGGGCTGGGG GGTTTTCTAT GTGCGGGCGA GCCCGGCGGC TGGGGTGGTG
TATGTGGAGT ATAACCCTCT TGAGACGTCT GTGGAGGAGG TGGCGGAGAG GGTGGCTAGG
GCTGGTTTTA GGGTGAGGGA GGTGAGGAGG GGGGAGGTGG GGGTGGACGT GGATAGGAGG
GCTGTGGAGG CGGAGGTGAG GGATTTGGGG AAGAGGCTTG TCCCGGCGGC GGTCGCGGCG
GCGGTGTTGA TGTTGGCCAT GGTGGGGGTC CTGCATGTTC CTCCGTTGGC GCAGTTGGCG
TTGGCTGGCG TGGCGCAGTT CTACTCTGGG TGGAGGTTTC TCTGGGGGGC GGCGCGGGCT
TTTAGGAATG GGACGGCGAA TATGGACACG TTGGTGGCGT TGGGGACCCT TTCCACTTTC
CTCTACAGCT CCTATGCCGT GGCTGTGGGG GGCCACGCCT TTTTTGAGGC GTCGGCGGCG
GTTATCGCCT TTGTGTTGGC GGGGAGGTAC GTGGAGGCTC TCATGAGGCT TAGGACTGGG
GAGGCTGTGA AGAGGCTGGC GCAGCTTCAG CCGCCGAGGG CCAGGGTGAA GAGGGGGGAG
GGCTGGGTGG AGGTGGAGGC GTCTGGGGTT GGGGCTGGGG AGTTGGTGGA GGTGCGGGAG
GGGGAGCGGG TGCCGGTGGA CGGCTACGTG GAGGAGGGGG TTGGGCTGGT GGACGAGTCT
GCCTTTACTG GGGAGCCTCT CCCCGTGGAG AAGGGGCGGG GCGACTTGGT GCTGGCTGGC
ACGGCGCTGG TGAGGGGGAG GCTGGTGGTT AGGGCCACTA GGTCTGGGAG GCACACCTAC
CTTGCCGAGG TGGTTAAGCT TGTGAGGCAG GCGCAGAACG CGCGGCTGCC TATTCAGAGG
CTTGTGGATA GGGTGGCTGG TGTATTCACC TGGGTGGTCA TCGGCGTTGC GGTCGCCACC
TTTGTGGGGT GGAGCGCCGT GGGGGCGCCG CTTTCGCAGG CCCTCTTGTT CACTGCGTCT
GTCCTCGTGG TGGCTTGTCC CTGCGCCTTG GGCCTCGCCA CGCCTCTGGC GGTGGTGGTG
GGGGTGGGGA GGGCGGCGGA GAGGGGGCTC TTGATTAAGA ACGTGGAGGC TGTGGAGAAG
GCTCTTAGGG CTAGGTACGT GGCGTTTGAC AAAACTGGCA CGTTGACGGT GGGCGCCCCC
AGGGTGGCCA AGTTTGTGGG GGACGGGGAG GCCTTGGCGT TGGCGGCCTC AGCCGAGGCT
AAGTCTACGC ATCCGTTGGG CAAGGCGTTG GTGGAGTACG CGGTGGAGAG GGGGGTCCGC
CTGGCGGAGC CGGAGTTCTT TGACACTTTC CCGGGGCAGG GGGTCTACGC CAGGGTGGAC
GGGGCCGTGG TGGGCGTGGG GAATGAGAAG CTGGTGGAGG GGCTTGGCGC GTCTATCCCC
GAGGATCTGC GGAGGGCGGC GGAGGAGCTG AGGGGGGAGG GGTACACGGT GGCGTACGTG
GTTGTGGACG GCGTGGTGAG GGGGGTGGTT GCGGTGGGGG ACGAGGTGAG GAGGGAGGCG
GCCGAGGTGG TGAAGAGGCT GAGGGCCATG GGGCTGGAGC CGGTGGTGGT GTCGGGGGAC
CACGAGGCGG CGGTGGCCAA GGTAGCCGCG AGGCTGGGCA TTGAGAGGTT CTACGGCGGC
GCCGACCCCG CGGCCAAGGC CGAGGTGGTG AGGAGGCTGA AGAGGGAGGG GGGCGTCATC
TTCATCGGCG ATGGGGTAAA CGACGCCCCT GCGCTGGCCG AGGCGGACGT GGGAATTGCG
GTGGCCTCGG GGACCGAGGT GGCTAAGGAG GCTGGGGACG TGGTGGTGAG GAGGGGGGAC
TTGGCCAAGG TGGTGGAGTT CCTCGAGCTG TCTAGGAAGA TCGTGGGCAC GGCCCGCTTC
AACCTCTTCT GGGCCTTTTT CTACAACGTA GTGCTTATAC CTGTGGCGGC TGGGGCCTTC
TACCCCGCGT TGTACCTCCG CCCGGAGTAC GCCGGGTTGG CCATGGCGCT GAGTAGCATC
TCAGTCACGT TGAACGCCCT GAGGCTTAGA AGGGCGTAG
 
Protein sequence
MLGVEVKVGV RVGGRSAVVK VLGMHCATCS LTVQRALLSV RGVRWAEASL ASGEARLVVD 
PEVLDWGELL RAVRGVGYDV YRESAHIVAD FRPEEVEAVE RAAGGWGVFY VRASPAAGVV
YVEYNPLETS VEEVAERVAR AGFRVREVRR GEVGVDVDRR AVEAEVRDLG KRLVPAAVAA
AVLMLAMVGV LHVPPLAQLA LAGVAQFYSG WRFLWGAARA FRNGTANMDT LVALGTLSTF
LYSSYAVAVG GHAFFEASAA VIAFVLAGRY VEALMRLRTG EAVKRLAQLQ PPRARVKRGE
GWVEVEASGV GAGELVEVRE GERVPVDGYV EEGVGLVDES AFTGEPLPVE KGRGDLVLAG
TALVRGRLVV RATRSGRHTY LAEVVKLVRQ AQNARLPIQR LVDRVAGVFT WVVIGVAVAT
FVGWSAVGAP LSQALLFTAS VLVVACPCAL GLATPLAVVV GVGRAAERGL LIKNVEAVEK
ALRARYVAFD KTGTLTVGAP RVAKFVGDGE ALALAASAEA KSTHPLGKAL VEYAVERGVR
LAEPEFFDTF PGQGVYARVD GAVVGVGNEK LVEGLGASIP EDLRRAAEEL RGEGYTVAYV
VVDGVVRGVV AVGDEVRREA AEVVKRLRAM GLEPVVVSGD HEAAVAKVAA RLGIERFYGG
ADPAAKAEVV RRLKREGGVI FIGDGVNDAP ALAEADVGIA VASGTEVAKE AGDVVVRRGD
LAKVVEFLEL SRKIVGTARF NLFWAFFYNV VLIPVAAGAF YPALYLRPEY AGLAMALSSI
SVTLNALRLR RA