| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0665 |
|---|
| Symbol | |
|---|
| ID | 4908116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 628060 |
|---|
| End bp | 628584 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640124414 |
|---|
| Product | pyruvate/ketoisovalerate oxidoreductase, gamma subunit |
|---|
| Protein accession | YP_001055557 |
|---|
| Protein GI | 126459279 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAGA TGCGTTTTCA CGGCCGCGGC GGACAGGGCA TGGTAACAGC GGCGCAAGTG
CTCGCCACGG CGGCCATACT CGAGGGCAAG TACGCACAAG CCTTCCCCGA GTTTGGCCCA
GAGAGGCGTG GCGCCCCCGT AAAGGCCTAT CTAAGGATCG CGGATACGCC TATATACGTA
AGAGAGCCCA TACTCCGCCC AGACGTAGTG GTGGTGGCAG ACCAGTCGCT TTTTAAGGCC
GAGAACCCCC TAGAGGGGGC GAAGGAGACC ACAGTGCTAG TGGTAAATGG GGTCTACAAG
GCCCCTGTAA AGACTTATTA CGTGGACGCA ACCTCTCTAG CAATGAAGAT CTTGGGCAGG
CCAATTGTGA ACACCGCCCT AATCGGCGCC GTGGTCAAGG CCACCGGCGT AGTGTTGCTG
GGATCTGTGG CCAAGGCCTT GGCAAAGTTC TTCTCTGGGA AGCTCTACGA CCTAAACCTC
AAACTCGTGG AAGCGGCATA CCAAGAGACT AGAGAGGTGC CATGA
|
|---|
| Protein sequence | MLEMRFHGRG GQGMVTAAQV LATAAILEGK YAQAFPEFGP ERRGAPVKAY LRIADTPIYV
REPILRPDVV VVADQSLFKA ENPLEGAKET TVLVVNGVYK APVKTYYVDA TSLAMKILGR
PIVNTALIGA VVKATGVVLL GSVAKALAKF FSGKLYDLNL KLVEAAYQET REVP
|
|---|
| |