| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0601 |
|---|
| Symbol | ileS |
|---|
| ID | 4908673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 562820 |
|---|
| End bp | 565753 |
|---|
| Gene Length | 2934 bp |
|---|
| Protein Length | 977 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640124349 |
|---|
| Product | isoleucyl-tRNA synthetase |
|---|
| Protein accession | YP_001055494 |
|---|
| Protein GI | 126459216 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCATG GGGATTTCAA GCTTGGACAC ACTTACAGCC CCCACAGCGT TGAAAAAGAG
GTAGCTGAGT TTTGGAACAG CAACGGCATC TTCCATAAGT GGAGGCAGTG GCGTGGAGGG
CCTAGGTTCA CGTTTCTAGA GGGGCCCCCT ACGACGAATG GCATGCCTCA TGTAGGCCAC
ATACGCGGTA GGACGTACAA GGACGTCGTA CTGAGGTTTC ACAGACTTCT GGGCTACGAT
GTGTGGGTCC AGGGCGGCTG GGATATGCAG GGCATGCCGG TGGAGTGGGA GGTGGAAAAG
AGGCTCAAGT TGCGGAGTAA GAAAGACATT GAGAAGTATG GTCTCGAAAA ATTTGCCCTC
GCATGTAACG CGCTAGTCGA CGAGTACCTA GAGCAGTGGA AAGAGTGGGG CACTAGGAGG
CTAGGCCTCT GGCTCGACCT AGATAACGCG TATGAGACGA GAAAGCCCAA CTATCTTGAA
TACGCCTGGC GCATTGTTAA AAAGGCGCAT GAGATGGGCC TTCTGACAGA GGACTACAGA
GTCCTCTGGT TTTGCCCCAG GTGTGAAACC TCGCTGAGCG ACCACGAGGT AGCACTAGGC
TACGAGGAGC GAGAAGACCC TTCTATCTAT GTAAAATTCA GAGTCGAGGG AAGCGAGAAC
GAGTACTTAG TTATCTGGAC TACTACTCCC TGGACCTTAA TAGATAATGA GGCAGTAGCT
GTACACCCAG ATTATACATA TGCCAAGGTA GAGGTAGGCG GCGAGAGGTG GTGGGTCGCT
GAACAGCTTG TGCCTAAGCT TATGGAGCTC TGGGGCATAA AGGAGTGGAA AATCTTAGAA
GTAAGGAGGG GCAAAGAGCT CCAAGGCCTA CGCTACGTGC ATCCCTTCCA CGAGGAAGTG
CCAGAGAGGG GCACAAGGCC TCACTACGTA GTAGTTGCCG ACTTCGTCAC CTTAGACCAA
GGCACAGGCC TTGTCCACAT AGCGCCTGGA CACGGCCCCG AGGACTTTGA AGTGGCCAAA
AAGTATGGAC TGAAGGTAAC CAACAGCGTT GAAGTAAACG GCGTATATAA CGAGCTAGCC
GGCAAATTCG CCGGGAAGTA CGTCCACGAC GTGGATAAAG AGGTGATTGA CGAGCTGAAG
AAGAAGGGGC TTCTGGTCTA TGCTGAGAAA ATTAGGCACG AGTATCCTCA CTGTTGGCGT
TGTGGCACAA AGCTAATACT GAGGGCCGAC CGCCAGTGGT TTATCGCAGT TTCAAAAATA
CGTGAAAAAA TGTACGCAGA GCTTCAGAGA GTAAACGTGG TGCCCCAGAA GCTGAGGGAT
AGATTCGACG TATTTGTACA AAACGCCAGA GACTGGAACA TAAGCAGGAG CAGGGTGTGG
GGCACTCCTC TCCCAGTGTG GCGATGCAAG AAAGATGGCA GAATTCTAGT GGTTGGATCA
ATAGAGGAGT TAAAGCGGCT TGCAAAAGAG CTTCCGCCAG TGGACGATTT TAAGCTAGTC
CACAGGCCCT GGATAGACTC TGTAGTATTA AAGACCGAGG ACTGCGACGA GTGGGCCCGC
GAGCCGTATG TCATGGACGT GTGGCTCGAC AGCGGCGTGG CGTGGATCGC CGCAGTAGAC
GGCGAAAGAA ACAGGGAGCT GTGGACCCAG CTCTTCCCAT ACGACTTTGT AACAGAGGGG
ATAGACCAGA CGAGAGGCTG GTTTTACTCC CTCCTGGCCA CCTCAGTCTT ATACACAGGC
AAAGCCCCAT ATAAGACAAT TCTAATACAA GGACTAATAC TAGATAAGCA TGGGCAAAAA
ATGTCAAAGA GCAAGGGAAA CGTTGTCTGG GCTAAAGACC TCTTTGAAAA ATACGGCGCA
GATCCAGTGA GACTTTACAT ACTCTCCAAG GCTGCTCCCT GGGAAGACTT GGCATTTGAC
CCCGACGAGG TTAAACACGT GATAAGTGAC TTAAACATAC TGTGGAACGT GGTGAAATTC
GCAGACACGT ACATGTCCCT AGACGGGTTT TCCAAAGACA AGTACCCATT AGAGGAGTGG
CTCAACAAGG CCCTAGAAGA GGACAAGTGG CTTTTATCAG AATTAAACCT TCTCACGATA
AAGGTAAAGG AGTATTTGAG GAACTTCGAA TTCCACAAGG CCGCTAACCT GTGGAGAGAG
TTCGTGGTAG AGACCTTGAG CCACAGATAT ATAAGACTGC TCAGGAGACG GGTATGGCTT
GAGGAGTCTA CTCCAGACAA ATACGCAGCA TACTCCGTCC TCTTCCACGT GCTTAAGAAC
GTGCTGATAA TAGGCTCAGT CTTTGTGCCA TTCGCCACAG AATATCTATG GCAAGCCTTT
GTGAGAAAGT ACGACAAAGA AGCAGAGGAG TCCGTCCACT TGGCCAAGTA CCCAGAGGAG
GGGGCAGTGG AAGAGGAGCT GATAAAAGTA TACGACGAAT TGTTTAAGGT CTTCTCAGTG
CTTGCCGAGG CTAGGAACAA GGCAGGTATA AAGCTCAGGT GGCCCATCAG AGAGGCGTAT
GTGGTCGGCG CCAGCTACGT AGATAGGTAT AAAGAGGCGT TGAAGTACCT GGGCAATGTA
AAAGAGGTAA AAGTGGGCAA GTGTCCCGAG GGTTACGTCA AAGCAGCAGA AGAGGGAGTT
GAAGTGTGTA TACCTGGGAA GCTGGAGCCT GAGCTGTTCT ACGAGGCGCT GAGTAGAGAG
ATCGTGAGAA GAATCCAAGT AATGCGCAAG GAGGCTGGGC TTCAAATAAA TGACACGATA
CGCGTCGTCG TAGACACGGC CTCGGACGAG GTAAAGAAGG CCGTTGAGCT TTTCCGCGAC
TACATAATGC GTGAGACTAG GGCCGTTGAG CTGAGCGTAG AGCATGCAGA CGAAGGCAAG
GAATGGGACA TATTAGGGGA GAAAGTTAAG ATATCTGTGA AATCAGCTGG GTAG
|
|---|
| Protein sequence | MRHGDFKLGH TYSPHSVEKE VAEFWNSNGI FHKWRQWRGG PRFTFLEGPP TTNGMPHVGH
IRGRTYKDVV LRFHRLLGYD VWVQGGWDMQ GMPVEWEVEK RLKLRSKKDI EKYGLEKFAL
ACNALVDEYL EQWKEWGTRR LGLWLDLDNA YETRKPNYLE YAWRIVKKAH EMGLLTEDYR
VLWFCPRCET SLSDHEVALG YEEREDPSIY VKFRVEGSEN EYLVIWTTTP WTLIDNEAVA
VHPDYTYAKV EVGGERWWVA EQLVPKLMEL WGIKEWKILE VRRGKELQGL RYVHPFHEEV
PERGTRPHYV VVADFVTLDQ GTGLVHIAPG HGPEDFEVAK KYGLKVTNSV EVNGVYNELA
GKFAGKYVHD VDKEVIDELK KKGLLVYAEK IRHEYPHCWR CGTKLILRAD RQWFIAVSKI
REKMYAELQR VNVVPQKLRD RFDVFVQNAR DWNISRSRVW GTPLPVWRCK KDGRILVVGS
IEELKRLAKE LPPVDDFKLV HRPWIDSVVL KTEDCDEWAR EPYVMDVWLD SGVAWIAAVD
GERNRELWTQ LFPYDFVTEG IDQTRGWFYS LLATSVLYTG KAPYKTILIQ GLILDKHGQK
MSKSKGNVVW AKDLFEKYGA DPVRLYILSK AAPWEDLAFD PDEVKHVISD LNILWNVVKF
ADTYMSLDGF SKDKYPLEEW LNKALEEDKW LLSELNLLTI KVKEYLRNFE FHKAANLWRE
FVVETLSHRY IRLLRRRVWL EESTPDKYAA YSVLFHVLKN VLIIGSVFVP FATEYLWQAF
VRKYDKEAEE SVHLAKYPEE GAVEEELIKV YDELFKVFSV LAEARNKAGI KLRWPIREAY
VVGASYVDRY KEALKYLGNV KEVKVGKCPE GYVKAAEEGV EVCIPGKLEP ELFYEALSRE
IVRRIQVMRK EAGLQINDTI RVVVDTASDE VKKAVELFRD YIMRETRAVE LSVEHADEGK
EWDILGEKVK ISVKSAG
|
|---|
| |