| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0584 |
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| Symbol | tfb |
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| ID | 4908862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 551063 |
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| End bp | 552058 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640124332 |
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| Product | transcription initiation factor IIB |
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| Protein accession | YP_001055477 |
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| Protein GI | 126459199 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTACAG CTACCCCGCC CGGCAAGCCC TTAAAATTCC GTATTCATCG AGATAGTGAG
GGGTATTTAA GCCTTGTCTC TGAGACAGGC GAGGTATATA GTTGCCCCGT GTGTGGAAAC
GACAAGTTTG TCTACAACTA CGAGAGGGGG GAGGTGGTGT GCATCGTATG TGGCACCGTG
GTTCAAGAGC AGTTGCTTGA CTTAGGGCCC GAGTGGAGGG CCTTCACCTC CGAGGAGAAG
GGCCAGAGGG CCCGTACCGG CGCGCCGTTG ACAAGGCTCA TCTCAGAGGC TTTAACCACG
GTGATAGATT GGAGAGATAG AGATGTGTCT GGAAAAGAGC TCGACATAAA GCGAAAGCTG
GAGGTTATTA GGCTTAGAAA ATGGCAGACG AGGGCGAGAG TTCAAACTTC GTATGAGCGC
AACTTTATCC AAGCGGCTCA GGAGCTTGAG AGATTAAAGA GCTCAATGGG CGTGCCGAGG
CCCTGCGTAG AGCAGGCCTT GGAGATTTAC AGGCAAGCAC TTGAAAAAGA GCTGGTACGG
GGCAGATCTG TAGAGGCCAT GGCCGCAGCG GCGTTGTACA TGGCTTGTCG TATGTTAAAA
ATGCCGCGCC CTCTCGATGA ATTGGTTAGA TATACTAAGG CCTCGAGGAG AGAAGTAGCT
AGGTGCTACC GCCTCCTACT TAGAGAACTT AATGTAAAAG TTCCCATAAG CGACCCCGTG
TTGTACATAT CTAGAATTGC AGAGCAATTA AAGCTCAGCG GCGAAGCGAT AAAACTTGCC
ATAGACATTT TACAAAAGGC GAAGAAGGCG GGTATCACGG CTGGGAAAGA CCCGGCGGGC
CTCGCGGCAG CCGCGGTCTA CATAGCCTCA CTAATGCTTG GCGATAACAA GACGCAGAAA
GATTTCGCGG TGGCCGCAGG CGTGACCGAG GTCACTGTGA GAAACCGTTA CAAGGAGTTG
GCCAAGGCGC TCAATATTAA AGTGCCAATC AAATAG
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| Protein sequence | MSTATPPGKP LKFRIHRDSE GYLSLVSETG EVYSCPVCGN DKFVYNYERG EVVCIVCGTV
VQEQLLDLGP EWRAFTSEEK GQRARTGAPL TRLISEALTT VIDWRDRDVS GKELDIKRKL
EVIRLRKWQT RARVQTSYER NFIQAAQELE RLKSSMGVPR PCVEQALEIY RQALEKELVR
GRSVEAMAAA ALYMACRMLK MPRPLDELVR YTKASRREVA RCYRLLLREL NVKVPISDPV
LYISRIAEQL KLSGEAIKLA IDILQKAKKA GITAGKDPAG LAAAAVYIAS LMLGDNKTQK
DFAVAAGVTE VTVRNRYKEL AKALNIKVPI K
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