Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0561 |
Symbol | |
ID | 4908656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 531944 |
End bp | 533569 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640124308 |
Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein |
Protein accession | YP_001055454 |
Protein GI | 126459176 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATTTGA CGATTCGGAT AAGTGGGGCA CAAGGAGAGG GCGTCGAAAC AGTCGGAAGA CTCTTGGCCA AAAGCTTTGC CCAGTTGGGG TACCACGTAT TCGCCTACAG GCAGTACGGA TCCATCATAA AGGGCAACCC CACCATGTTT TACCAAGTGA GAGTGTCCGA CGAGAAGATA TATAGCCACG GCACGTGGCG CAGCTACGAC GTACTAGTCG CCCTAAACGA CAAGGCGCTA CAGGCGCACA GAGGTGGGGC CAGGCACGTG ATCTCGGAAT CTGAAATACC CTTCACGGAA ATCGCGGTTA AGCACGGCGA CAGAATCATG AGAAACACAG CGGCGCTTGG AGCACTGGCG GCCCTCATAG GCATGGAGCT GACGCCCATC GAGGGCGTCA TAAGGAGGGA GTTCGGCGAG AGGGGGGAGA AGATAGCTGA GGCAAACATA GCCGTATTGA GGGCCGCCTA CGACGCCGCA CTAAAGAGGC TGGGGTCTGT CTACGAGGTG AAAAGAGTAG GCGAGCCCAG GGTGTTGATG TCCGGGGCCG AGGCGCTTGC CGTCGGCGCC GTTATGTCCG GCATGAAGTT CTACGCCGCG TATCCCATGA CCCCGGCCAG CCCCATCTTG CACTGGCTGG CGGAGTGGGG GCCCAAATTC GGCGTAGCGG TAGTACAGCC CGAGGACGAA ATTGCGGCAA TAAACATGGC CATAGGGGCC GCTTATGCGG GAGTCAGAGC CGCGGTGGGC ACCTCCGGCG GCGGCTTCGA CCTAATGCAC GAGGCCTTTG GACTCGCCGC CATGATTGAG ACGCCTCTCG TCGTCTTTCT CGCGCAGAGG GGCGGGCCCA GCACTGGTGT GCCCACTGAG ACTGAGCAGT CTGACTTGCT CATGGCGCTC TCCCCCTCGC ACGGGGAGTA CCCCCACGTG GTCATAGCGC CGAGGTGGAT AGAGGAGGGG CTCTACGCCA CCGCCAAAGC CTTTAACATA GCCGAGAAGT ACCAAGTGCC TGTGATCGTG CTCGTGGACT TGTACTTCAC AGAGTCGCTG GCAACCGTGG AGTTCGACCC CCACAGGTTC AAAATTGAGA GGGGGGAGCT ACTGCAGGGG CCCCTGGTGT GGGAGGAGTA CAAGAGGTAC AAGATAGCGG AGAGCGGAGT CTCCCCGAGG GCCCTCCCGG GCACCCCCGG GGGCATGCAC ATAGCCACAA GCGACGAGCA CGACGAGCGC GGCGACGTGA TTACAGACAC CCACCAGCCT GCCATAAGAA AGGCCATGCA CCAAAAGCGC ATGGTCAAGC TGACCAAGAT CGTGGAAGAG ATGGAGCCGC CGATGATACA AGAGGGGGAC GTAGTGGCGC TGGCTTGGGG ATCCACCGCC ATGCCCCTCC TAGACTACGC AAAGGGGAGA AAGGTGGGCC TGGCGCTGTT CAGAGACCTC TACCCGCTGA GCGTCGACGG GTGGGCGCAA CGGCTAAACG AGGCAAAGGA GGTGGTGGCC GTCGAACTAA ACTACAGGGG GCAGTTCGCC GAGTATCTGG CAAGCAAAGG CGTCAAAGTG ACTAGGCGCG TGTTAAAGTG GTGGGGAGAG CCCTTTAGCA TAGACGAGCT GGGCGAGTGG CTATGA
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Protein sequence | MDLTIRISGA QGEGVETVGR LLAKSFAQLG YHVFAYRQYG SIIKGNPTMF YQVRVSDEKI YSHGTWRSYD VLVALNDKAL QAHRGGARHV ISESEIPFTE IAVKHGDRIM RNTAALGALA ALIGMELTPI EGVIRREFGE RGEKIAEANI AVLRAAYDAA LKRLGSVYEV KRVGEPRVLM SGAEALAVGA VMSGMKFYAA YPMTPASPIL HWLAEWGPKF GVAVVQPEDE IAAINMAIGA AYAGVRAAVG TSGGGFDLMH EAFGLAAMIE TPLVVFLAQR GGPSTGVPTE TEQSDLLMAL SPSHGEYPHV VIAPRWIEEG LYATAKAFNI AEKYQVPVIV LVDLYFTESL ATVEFDPHRF KIERGELLQG PLVWEEYKRY KIAESGVSPR ALPGTPGGMH IATSDEHDER GDVITDTHQP AIRKAMHQKR MVKLTKIVEE MEPPMIQEGD VVALAWGSTA MPLLDYAKGR KVGLALFRDL YPLSVDGWAQ RLNEAKEVVA VELNYRGQFA EYLASKGVKV TRRVLKWWGE PFSIDELGEW L
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