Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0528 |
Symbol | hisS |
ID | 4909550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 503444 |
End bp | 504709 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640124274 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_001055421 |
Protein GI | 126459143 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGGT TGCCAGACCA CTTGAGGAGG CCTGTCAGAG GAATGCGCGA CTGGCTACCG CATCAATACT ACGCGCTTCA ACAACTCGAG GCTCTACTGT CGCGGGTGGC GGAGTCTTTT GGCTATAGGC GCGTGGAGAC GCCCGTCGTG GAGCACTTCG AGGTATTGGC CAGGAAGGCG GGGCAGGAGA TCGTCAACGA GATATACTAC TTTAGAGACA AGGCGGGGCG CGAACTGGGC CTGCGCTTCG ACATGACTGT GCCAATAGCC CGCGTCGTCT CCTACAACTT AGACCTGCCG CGGCCCATCC GTTGGTACTA TTTTACAAAA GTCTTTAGAT ACGACGAGCC TCAGCACGGC AGATATAGAG AGTTTTACCA ATTCGGAGTA GAGCTCATAG GCTCGGCAAG CCCAAGAGCA GACGCAGAGG TGGTACATCT GCTGGCTGAG TCACTAGCCG CGGCAGGTGC CTCCAACTAC GTCATTAAGC TAAACGACAG ACGCGTCGTA GACAAGCTTC TGGAAGGCAT GGGCCTCGCG GCGTATAAAG ACGTCGTTTA CAAGGCGTTG GACAAGAGGT ACAAAGCGCC ACGGGAGGAG GTGGTGGGAA TTATGACGAG GGGCGGAGTT CCGCCGAGCA AGGCCGAGGA GTTGTACGAA AAGGCGACAG AGATGCCTCT CCAAGAGGCT GTGGATTTTG TAACACGTAT TGACAAGGAG CTTGGCGGCT TCTACGCCGC CTTTGTAAAA TACTTAGAAG CCGCCGTCGG CCTAGAGAGG CTTATATTTG ACCTGTCGAT TGTCAGAGGG CTGGACTACT ACACGGGGGT TGTCTTCGAG GCGTTTGCCG GCGAATATAA GCTGGCCGTG GGAGGCGGCG GCAGATACGA CGACCTTCTC CAGCTCTACA GCGGGGTAAA AACCCCCGCC TTAGGCTTCG CCATAGGCGT CGAAAGGCTA ATGGAGGCCG TGGGGTTGCA AGCAGTGGAA AAGCCGCTGG ACTACTACAT CTACATATTC GACGAAAGCG CCTACCAGAC AGCTATCTAC ATCGCCAGAG AACTACGCAG GAAGGGATAC AGCGCAGTGG TAGAACTCGG CGATAAGGGG CTGAAAGACG CCTTTGAATA CGTGTTGAAA ATTGGCACAA GGTTCTTAGT CATTCTGGGG AAGAAGGAGC TAGAGAAGGG CGTTGTGAAA GTTAGAGACT TACAAAAACG AGAAGAAGTG GAAAAACCCA TCGACGAGTT TATACGCGGC GCATAG
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Protein sequence | MSGLPDHLRR PVRGMRDWLP HQYYALQQLE ALLSRVAESF GYRRVETPVV EHFEVLARKA GQEIVNEIYY FRDKAGRELG LRFDMTVPIA RVVSYNLDLP RPIRWYYFTK VFRYDEPQHG RYREFYQFGV ELIGSASPRA DAEVVHLLAE SLAAAGASNY VIKLNDRRVV DKLLEGMGLA AYKDVVYKAL DKRYKAPREE VVGIMTRGGV PPSKAEELYE KATEMPLQEA VDFVTRIDKE LGGFYAAFVK YLEAAVGLER LIFDLSIVRG LDYYTGVVFE AFAGEYKLAV GGGGRYDDLL QLYSGVKTPA LGFAIGVERL MEAVGLQAVE KPLDYYIYIF DESAYQTAIY IARELRRKGY SAVVELGDKG LKDAFEYVLK IGTRFLVILG KKELEKGVVK VRDLQKREEV EKPIDEFIRG A
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