Gene Pcal_0381 details

Gene Information

• Locus tag: Pcal_0381
• ID: 4908529
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 367505
• End bp: 369571
• Gene Length: 2067 bp
• Protein Length: 688 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640124133
• Product: CBS domain-containing protein
• Protein accession: YP_001055282
• Protein GI: 126459004
• COG category: [R] General function prediction only
• COG ID: [COG0517] FOG: CBS domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.0243844
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGTGC AGGTCAACTT TAGACAAGTC GCCTCCGTTG CCATTGTCGC GTGGTTCGGC 
GCCTTTTTGG AGTGGCTCGA CTTTTACACA TACGCCCTAC TAGCTGGCTT GGTGGCCAAG 
ATATTCTTCC CATCGGCAGA CCCCATTGCT TCTCTCCTCG CCTCATTTGC GGCGTTGGCC 
ATAGGCTTCT TGTTTAGGCC GCTTGGGGCA ATAGTGTTTG GAAAAATTGG GGACCAGTTT 
GGCAGAAAAG TGGCGTTTAT CACAGCAATG TCGCTCATGT TAGTTGGCAC CCTTGGCATA 
GGCCTACTGC CTGGATACGC CGAGATTGGT ATACTGGCGT CTGTAGGCGT CTTTATCCTG 
AGAATTATCC AGGGCCTGGC GCTGGGAGGG GGATATGGAG CAGCCATTAC GTACTTGGGA 
GAGTTTGTCC CCGAGCACAG GAGGGGCTTC TTCACTGGGT TCCTCTTCAC CACGCCTGCC 
GCTGGCATGG CCACAGTGGG CGCGTTGATA TGGCTGTTTT CCACAATGCT GGGCACTCAG 
CAGTACAACG CGTGGGGCTG GCGCCTCAAC TTCATAGTGG CTGGCGTTAT TGTGTTCATA 
ATTGTATTGG CTATGCACCT GTTCTACAAG GAGACGCCAG TCTTCTCTAT GTTGAGGGCC 
GTGAGAAGAG TCACGTCTGC GCCTATTAGG GAGGTGTTCT CCCGGAAGTA TCTTCCCCTA 
GTCCTATTGG CGTGGATAGG CGTAGTGGGA GCCCACGGGC CCATCTGGTA CACGAACCAG 
CTCTTCAATA CATATTACGT AGGCCCTAAC TTCCAGAAGT ATGTTGACTC AGCCACTGCC 
AGCGCGTTGC TGTCCACGGC CACCTACGCC GCGCTTTGGA TGTACCCGCT GTTCGGCTAC 
ATCTCCGACA AGGTGGGGAG GAAGCCCATC CTTCTGCTCG GTATCTATGG CAACGCCCTG 
TGGTTCCCCA TAGCCTTCTG GCTGATAGAC CAAGTTGGCC CGCAGAAGGA CTTGACGGCG 
CTGTGGTTGC TCTTCTGGTC AATGACCTTG TTCAATGGCA TTGGTTACAG CGGGGCAATG 
TCCGCCTTCT TGCTTGAGCT GTTTCCGGCG AGGATTAGGC TGTCCGCCGT CTCTCTGGCA 
TACAACTTGG GCTACGGCGT CACAGGCGGC TTAACGCCGT TTGTAATTAC CTGGCTCTAC 
TCCATTACGA AGAACGTGTA CCTCTCCACT ATCCTGTGGA GCACTGTGGT TCCCATGGTG 
ATGGCGCTAT GGTACGCGCT TAAGGGCCCA GAGACCCTCG GTACTAGGAT ATGGGCGGAG 
TTCGCCGCAG AGAAGTTTGC TAAGAAGACT GTCACTCTGC CTGCCACTAC GCCCATTAGA 
GAAGTGGTGA AGGCCATGGT GGACACCGGG GTTAAGTACG TGGTGTTGAC GGGAAGTGTC 
GTGGGCATAT TTGGGACACG TAGCCTAATT AGGGCGCTTG CCGCCGGCGC CAAGTTAGAT 
GAGCCGGCTG GCAATTATGC GGTAAAGACG TCGTGTATTG ACGCCAAGGC CCCCGTCACA 
GAGGTCTTCG TAGCCTTGGA ACAGTACAAC GTCAGGGCCG TGCCAGTGTG CGAGGGAGGG 
AAGCCAGTGG GCATTGTAGA GGCGAGGGAG CTTGTGAACG AGGCACTGGG CTTGAGGAGC 
GTGTTGAAGA AGAAGGTGGC GCTTCGCTTC AACGTTTACG ATGCGGCGCC TAGGGAGCTA 
GTCACCATAG CTCCCGACAA GTCCCTAAAG GAGGCCATAG ACCTCATGGC TAAGTACAAC 
ATAGGCTTTC TGCCGGTGGT TGAGGACGGG AAGCTCGTGG GCGTATTATC TGAGACCGAC 
ATTGTAAAGG CGGTTGCCAA GGGCGTAGAC CTAGGCAGGC CAGTGGCAGA GTTTGCAAAT 
AAGCCCATCG TAGTAGACAA AAGCGCCACA TTGAGAGATG CGGCTGAGCT CATGGTGAAG 
TACAACATTA GGCACATTCC CATAGTAGAA GACGGCAAAG TGGTAGGGGT AATCTCAGTA 
AGAGACGTGT TAAAGGCGAT AGGATAG 

 

Protein sequence

MSVQVNFRQV ASVAIVAWFG AFLEWLDFYT YALLAGLVAK IFFPSADPIA SLLASFAALA 
IGFLFRPLGA IVFGKIGDQF GRKVAFITAM SLMLVGTLGI GLLPGYAEIG ILASVGVFIL 
RIIQGLALGG GYGAAITYLG EFVPEHRRGF FTGFLFTTPA AGMATVGALI WLFSTMLGTQ 
QYNAWGWRLN FIVAGVIVFI IVLAMHLFYK ETPVFSMLRA VRRVTSAPIR EVFSRKYLPL 
VLLAWIGVVG AHGPIWYTNQ LFNTYYVGPN FQKYVDSATA SALLSTATYA ALWMYPLFGY 
ISDKVGRKPI LLLGIYGNAL WFPIAFWLID QVGPQKDLTA LWLLFWSMTL FNGIGYSGAM 
SAFLLELFPA RIRLSAVSLA YNLGYGVTGG LTPFVITWLY SITKNVYLST ILWSTVVPMV 
MALWYALKGP ETLGTRIWAE FAAEKFAKKT VTLPATTPIR EVVKAMVDTG VKYVVLTGSV 
VGIFGTRSLI RALAAGAKLD EPAGNYAVKT SCIDAKAPVT EVFVALEQYN VRAVPVCEGG 
KPVGIVEARE LVNEALGLRS VLKKKVALRF NVYDAAPREL VTIAPDKSLK EAIDLMAKYN 
IGFLPVVEDG KLVGVLSETD IVKAVAKGVD LGRPVAEFAN KPIVVDKSAT LRDAAELMVK 
YNIRHIPIVE DGKVVGVISV RDVLKAIG