Gene Pcal_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0376 
Symbol 
ID4908224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp361418 
End bp362308 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content68% 
IMG OID640124128 
Producthomoserine kinase 
Protein accessionYP_001055277 
Protein GI126458999 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0083] Homoserine kinase 
TIGRFAM ID[TIGR00191] homoserine kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCGC CGTCCACAAG CGCAAACCTC GGCGCAGGCT TCGACGTCGT GGCCGTGGCG 
CACGACGCCT ACTTCGCCGA GGCGTACGTG GCCGTGGAGC AGGGCTGCGG CGTGGCTGTA
AAATTCAAGG GATACGACCC GGGGGAGAAC AACACCGTGT CACTGGCCTT CCGCCACCTC
TTCAACATGC TCGGCATCTG TAGACAGGTA GAGGTGGTGG TGGACAACCG CATCCCCCTT
GCCAGGGGTC TGGGCAGCAG CGGGGCCTCC GCAGTGGCCG CCCTAGCCGC GTTCATCCGC
GAGGCGGGGC TGAAGGCGGA GCCCAAGCTG GTAGTAGAGG CGGCGGGCCT TGGGGAGGTG
GCCGCCGCCG GGTCGCCCCA CTTCGACAAC GTGGCCGGAG CCGCCCTCGG CGGGGCAGTG
GTGGTGGTCT CCACGTCGCC GCTGGAGGTG GTGAAGTTCA GCCCCAAGCT CCTCTTCGTG
GTGGGGGTGC CAGACGTCCC GCCGATCCCA GAGAAGACTA GGCTCATGAG GAGCGTCCTA
CCCAGGGAGG TGCCCTTCAA GACCTATGTT GCCCAGTTGG CCAGAGTCTC TGCCCTAGTG
GCTGGCTTCG CCACCTCTAA CCCGCGGCTT GTGGCACTGG GCATGTCAGA CGACGTGGTT
GAGCCGGCGA GGGCGCCCTA CGTACACGGG TACGCCCGGG CCAGGCGGTA CGCCCTCGAG
GCCGGGGCGC TGGGCTTTGC AATATCCGGC GCCGGGCCCT CCGTGGTGGC GCTGGTAGAC
GACAAGCACA GCGACGCTGT AAGGGCGGCG CTCGCCAGGG CCTATGCGGA AGAGGGGCTT
AGGGCCGAGG TAAAAGTGGC GCAGGTGGCA GAGGGGGCGC TGGGGGTATG A
 
Protein sequence
MRAPSTSANL GAGFDVVAVA HDAYFAEAYV AVEQGCGVAV KFKGYDPGEN NTVSLAFRHL 
FNMLGICRQV EVVVDNRIPL ARGLGSSGAS AVAALAAFIR EAGLKAEPKL VVEAAGLGEV
AAAGSPHFDN VAGAALGGAV VVVSTSPLEV VKFSPKLLFV VGVPDVPPIP EKTRLMRSVL
PREVPFKTYV AQLARVSALV AGFATSNPRL VALGMSDDVV EPARAPYVHG YARARRYALE
AGALGFAISG AGPSVVALVD DKHSDAVRAA LARAYAEEGL RAEVKVAQVA EGALGV