Gene Pcal_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0304 
Symbol 
ID4908228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp295228 
End bp296679 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content63% 
IMG OID640124054 
Productradical SAM domain-containing protein 
Protein accessionYP_001055205 
Protein GI126458927 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACGGG TCCGCTACAG GAAGAGCGGG GTCAAGGTGG CCCTGGCGTA CCCCTCCACA 
TACTCCGTTG CCATGTCCAG CGCGGTGTAC CACGTGCTCT ACTTCAAGCT CCAAGACGAG
GGGTTCTACG TGGAGAGGTT CACGGCGGAC AGGGGGCCAA GGGGCGTGGA GGAGGGGACC
CCGCTCTCCC ACTTCGACTA CGTGGTTGCC ACCGTCCACT ACGAGCTCGA CTACATAAAT
TTGACAAAGT TGCTGATCGA GGCCGGCGTA GAGCCCTGGG CCAGGGCGAG GGAGAGGCCG
AAGGTCGTCG TAGGCGGGCC CCCCGTCACG GCTAACCCAG AGCCCCTGGC CGACCTAGCC
GACTTAATCG TGCTCGGGGA GCTAGAGGCC GTGTGGGATA AGGTCGTCCA GTACTTGGCC
ACAGGGGACA GAGTGGAGGG CGCCGGCATG TACTACCCAG CCGACGGGCC GTACGAAGTC
GCCGTGGCCT ACGCCAAAGA CGTGGAGGAG GCAGACTACA GAAGGCTGCC GGAGCCCGAG
GCCGCGTTTA GCCTCTCGGT GGAGTTGGCC AGGGGTTGCC CCTTCTCCTG CCTATTCTGC
ATGGAGAGCT ACATCGCCAA GCCCTATAGG CCGAGGGGGT GGGAGAAGGC GCTGGAAGAG
GCCGAGCTTT TGTACAAGAG GTACGGGGTG AGGCCCTCCC TCGTTGCCCT CACAGCCAAC
GCCCACCCAG GCTTCAAGGA GCTCCTCTCC GAGGCGGCGA GGAGGTGGGT CCCCCTTTCT
CTGCCGTCGC TCCGCGCCGA GCTTCTCGAC GACGAGGCGC TGGAGCTTGT GGCAAAGCTG
GGCCAGAAGA CGTTGACCAT AGCCCCCGAG ACCAGCGAAC GCCTCAGAAA GGCGCTGGGG
AAAGAGGTGT CAGACGCCGA CGTGTTAAAA GTGGCAAAGA GGGCGGGGGA GCTGGGGATG
AAGCTGAAAA TGTACCTAAT GGTGGGGCTT CCCTGCGAGC GGGAGAAGGA TCTGGAGGCG
GTGAAAGCCC TCGTAAAAGA GGCGGCTAGG TACGCCAAGC TGTACTTAAG CGTAAACCCG
TTTATTCCAA AGCCGCAGAC CCCCCTCCAG TATCACCCAA TGGAGGAGCC CCAGGCCCTT
GAGGAGAAGA TCGAGTCCAT TAGAGAGGTG CACCGCGGCG AGTTCTCCAG CTACGACCCC
CGCCTGGCGG CAATACAGGC GGCCATTGCG CTGGGGGGCC GCGACGTGTC GCGGCACATA
GTTGAATCTG CGTCGTCTGA CAAGCCCATG GCGTACTGGA GGCGGCTGTT GAAGGCGGGG
GCTCTGAGCT ACGTCTTTAG GCCCAGAGAG GAGCCGCTAC CCTGGAGCCA CGTCAAGGGC
TTCTACGCCG CTGAGGAGCT GAGACAGCGC TACCGCCGGT ACGTAGAGGC GGCCTGCGGC
TCTGTGTCGT GA
 
Protein sequence
MRRVRYRKSG VKVALAYPST YSVAMSSAVY HVLYFKLQDE GFYVERFTAD RGPRGVEEGT 
PLSHFDYVVA TVHYELDYIN LTKLLIEAGV EPWARARERP KVVVGGPPVT ANPEPLADLA
DLIVLGELEA VWDKVVQYLA TGDRVEGAGM YYPADGPYEV AVAYAKDVEE ADYRRLPEPE
AAFSLSVELA RGCPFSCLFC MESYIAKPYR PRGWEKALEE AELLYKRYGV RPSLVALTAN
AHPGFKELLS EAARRWVPLS LPSLRAELLD DEALELVAKL GQKTLTIAPE TSERLRKALG
KEVSDADVLK VAKRAGELGM KLKMYLMVGL PCEREKDLEA VKALVKEAAR YAKLYLSVNP
FIPKPQTPLQ YHPMEEPQAL EEKIESIREV HRGEFSSYDP RLAAIQAAIA LGGRDVSRHI
VESASSDKPM AYWRRLLKAG ALSYVFRPRE EPLPWSHVKG FYAAEELRQR YRRYVEAACG
SVS