Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0304 |
Symbol | |
ID | 4908228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 295228 |
End bp | 296679 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640124054 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001055205 |
Protein GI | 126458927 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGACGGG TCCGCTACAG GAAGAGCGGG GTCAAGGTGG CCCTGGCGTA CCCCTCCACA TACTCCGTTG CCATGTCCAG CGCGGTGTAC CACGTGCTCT ACTTCAAGCT CCAAGACGAG GGGTTCTACG TGGAGAGGTT CACGGCGGAC AGGGGGCCAA GGGGCGTGGA GGAGGGGACC CCGCTCTCCC ACTTCGACTA CGTGGTTGCC ACCGTCCACT ACGAGCTCGA CTACATAAAT TTGACAAAGT TGCTGATCGA GGCCGGCGTA GAGCCCTGGG CCAGGGCGAG GGAGAGGCCG AAGGTCGTCG TAGGCGGGCC CCCCGTCACG GCTAACCCAG AGCCCCTGGC CGACCTAGCC GACTTAATCG TGCTCGGGGA GCTAGAGGCC GTGTGGGATA AGGTCGTCCA GTACTTGGCC ACAGGGGACA GAGTGGAGGG CGCCGGCATG TACTACCCAG CCGACGGGCC GTACGAAGTC GCCGTGGCCT ACGCCAAAGA CGTGGAGGAG GCAGACTACA GAAGGCTGCC GGAGCCCGAG GCCGCGTTTA GCCTCTCGGT GGAGTTGGCC AGGGGTTGCC CCTTCTCCTG CCTATTCTGC ATGGAGAGCT ACATCGCCAA GCCCTATAGG CCGAGGGGGT GGGAGAAGGC GCTGGAAGAG GCCGAGCTTT TGTACAAGAG GTACGGGGTG AGGCCCTCCC TCGTTGCCCT CACAGCCAAC GCCCACCCAG GCTTCAAGGA GCTCCTCTCC GAGGCGGCGA GGAGGTGGGT CCCCCTTTCT CTGCCGTCGC TCCGCGCCGA GCTTCTCGAC GACGAGGCGC TGGAGCTTGT GGCAAAGCTG GGCCAGAAGA CGTTGACCAT AGCCCCCGAG ACCAGCGAAC GCCTCAGAAA GGCGCTGGGG AAAGAGGTGT CAGACGCCGA CGTGTTAAAA GTGGCAAAGA GGGCGGGGGA GCTGGGGATG AAGCTGAAAA TGTACCTAAT GGTGGGGCTT CCCTGCGAGC GGGAGAAGGA TCTGGAGGCG GTGAAAGCCC TCGTAAAAGA GGCGGCTAGG TACGCCAAGC TGTACTTAAG CGTAAACCCG TTTATTCCAA AGCCGCAGAC CCCCCTCCAG TATCACCCAA TGGAGGAGCC CCAGGCCCTT GAGGAGAAGA TCGAGTCCAT TAGAGAGGTG CACCGCGGCG AGTTCTCCAG CTACGACCCC CGCCTGGCGG CAATACAGGC GGCCATTGCG CTGGGGGGCC GCGACGTGTC GCGGCACATA GTTGAATCTG CGTCGTCTGA CAAGCCCATG GCGTACTGGA GGCGGCTGTT GAAGGCGGGG GCTCTGAGCT ACGTCTTTAG GCCCAGAGAG GAGCCGCTAC CCTGGAGCCA CGTCAAGGGC TTCTACGCCG CTGAGGAGCT GAGACAGCGC TACCGCCGGT ACGTAGAGGC GGCCTGCGGC TCTGTGTCGT GA
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Protein sequence | MRRVRYRKSG VKVALAYPST YSVAMSSAVY HVLYFKLQDE GFYVERFTAD RGPRGVEEGT PLSHFDYVVA TVHYELDYIN LTKLLIEAGV EPWARARERP KVVVGGPPVT ANPEPLADLA DLIVLGELEA VWDKVVQYLA TGDRVEGAGM YYPADGPYEV AVAYAKDVEE ADYRRLPEPE AAFSLSVELA RGCPFSCLFC MESYIAKPYR PRGWEKALEE AELLYKRYGV RPSLVALTAN AHPGFKELLS EAARRWVPLS LPSLRAELLD DEALELVAKL GQKTLTIAPE TSERLRKALG KEVSDADVLK VAKRAGELGM KLKMYLMVGL PCEREKDLEA VKALVKEAAR YAKLYLSVNP FIPKPQTPLQ YHPMEEPQAL EEKIESIREV HRGEFSSYDP RLAAIQAAIA LGGRDVSRHI VESASSDKPM AYWRRLLKAG ALSYVFRPRE EPLPWSHVKG FYAAEELRQR YRRYVEAACG SVS
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