Gene Pcal_0124 details

Gene Information

• Locus tag: Pcal_0124
• ID: 4908901
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 121366
• End bp: 121908
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640123875
• Product: abortive infection protein
• Protein accession: YP_001055028
• Protein GI: 126458750

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTACTTTG CCAAGCCGCC GATCTGCCTA GGCCTCTACA TAGGCGCAGT GATCTACGCC 
GCGTTCCTTC CCGCTGGACT ACTCACCCAA TGGAGGTTAA GCAGAGCTTT CCCGCTTGCT 
TTCGCCGCTT ACTTCTTAGC CCTCATAGCC GCGGGACTAA TCGCCGCAAT ACCGCCGATA 
GGGGCCGAAT TCCAGCGGCT ACAGAGGGCA CAAGCCGAGT TCTTCGCAAG AGCTGCCACA 
TGTCCCCTCG GGACTGTTGC AGTCGGAGCG CAAGCCCTTA TCCTTGCACC GCTGGTGGAA 
GAGACCCTCT TCCGCGGCAT GCTCTTTGAG GAAGTGAAAA GAAAGGTCGG CACAGTCGCG 
GCCTACCTCG TGTCCTCGGC GCTATTCGCA GTGCTCCACA GCCCAGGGCT CGGCGCCCTC 
CCCATCTTCG TCATCTCCCT CGCGCTGGCT TACGCATACC ACAAACACGG TCTAATCTCC 
TCCGTGTTGA TACATTTTAC ACAGAACTTT ATCGCCTTCG CCATGGCTCA CGGCGGCGTT 
TAG 

 

Protein sequence

MYFAKPPICL GLYIGAVIYA AFLPAGLLTQ WRLSRAFPLA FAAYFLALIA AGLIAAIPPI 
GAEFQRLQRA QAEFFARAAT CPLGTVAVGA QALILAPLVE ETLFRGMLFE EVKRKVGTVA 
AYLVSSALFA VLHSPGLGAL PIFVISLALA YAYHKHGLIS SVLIHFTQNF IAFAMAHGGV