Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0094 |
Symbol | |
ID | 4909616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 94691 |
End bp | 95044 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640123846 |
Product | hypothetical protein |
Protein accession | YP_001054999 |
Protein GI | 126458721 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000287436 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGCACGGC GAGGAAGCGG ACGGATAACG TGGGGCGACG TGAGGCGGGG CATAGTGTGG TTCTTCGTTA CTATCTTCTT CGCCGCGTTT ACCTGGTTTA TTGTAACGGC CTTCTTCAAT TACTACTACA CGCTTAATGT GACGCAGTAT GTAGTCAACT TCCTTGATCG CCTCGTCGGC CAAGGCCTCG CCCTTAATTA CACATGCAGT GCAAGCCCCT GTAGAATCGA CCTAGGCCCA GGTGACAAGG TGCTGAACTT CACCGTAGAG AACCCCACCT CGTCGCCACT GGTTGTACTA CTAAGAGGGG AAGGCGGAGC CGTTGCAACC GCCGCTGTGC ACGGTTCAAA CTGA
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Protein sequence | MARRGSGRIT WGDVRRGIVW FFVTIFFAAF TWFIVTAFFN YYYTLNVTQY VVNFLDRLVG QGLALNYTCS ASPCRIDLGP GDKVLNFTVE NPTSSPLVVL LRGEGGAVAT AAVHGSN
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