| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0088 |
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| Symbol | |
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| ID | 4908792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 87763 |
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| End bp | 89196 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640123841 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001054994 |
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| Protein GI | 126458716 |
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| COG category | [B] Chromatin structure and dynamics
[K] Transcription |
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| COG ID | [COG1243] Histone acetyltransferase |
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| TIGRFAM ID | [TIGR01211] histone acetyltransferase, ELP3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0202426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGATTTA TTCGGGCCGC CAGCGGCGTA CACGTCGTGG CCGTCATGAC GCACCCCATG
CCTTGCCCAG GCCGTTGCAC CTTCTGCCCA ACTGCCAGAG ACGCCCCCAA GTCCTACCTC
TCCGACAGCC CAGTGGTGCT GAGGGCCAAG AGGAGCGGCT ACGACCCCTA CCTCCAGACC
GCCGGCAGAG TCAAAGTCTA CCTTGAAAAC GGCCACGTGC CCAGCAAAGT AGAGGTGGTG
GTGATGGGGG GCACCTTCTC CGCCCTGCCC CGGGGGTACA GGGAGTGGTT TGTGGCAAAC
GTCTACAAGG CGCTCAACGA CTACCCCAAC TGGGCGGCCA AGGCCGCGGA GTCCCCCTCG
CTGGAGTTTG AGCAACTGCG CAACGAGGCC GCCCTCCTGA GAATGGTGGC GCTAGCCGTG
GAGACTCGGC CGGACTACGT CGACGAGGGG GAGGTGGACT TCCTCCTCCA GCTGGGCGTC
ACCAGGGTGG AGCTGGGGGT GCAGTCCATC TACGACGACG TCTTGGCTAA GGTGAAGAGG
GGCCACGGGG CCAGGGAGGC CGCGGAGGCC ACTGCCCTTC TAAAGGACGC GGCGTATAAG
GTGTGCTACC ACCTAATGCC CGGCCTCCCC GGAAGCGACC CAGACCGGGA CCTCGAGATG
TTCAAGACAG TGTTCTCCGA CCCGGCCTAC ATGCCAGACT GCGTCAAGAT ATACCCCCTA
TACGTCGTGC CGGGGACTGA GCTCTACGAG CAGTGGAGGC GCGGCGGGTA CAAGAGCTAC
GACGAGGAGA CTTGGCTAGA GCTCTTGGCC AAGATCTACG CCTCTGTCCC CAGGTGGGCC
AGAGTCATGA GACTCGGCCG CGACATACCT CTACACCACG TGGTAGATGG CCCAAGGTGG
GGCAACATGC GGCAGGTGGT GTTGAAAAAG ATGGCCGAGG TGGGCCTCCC CTGCGTAGAG
ATTAGGTGCC GCGAGGTTGG GGTCAAGTTA GCCAACGGGG CGCCGGTGGA GCCCGGGCCA
ATTGAGATCA AGAGGGCGGT CTACGAGGCG TCTGGCGGCG TCGAGGTGTT TTTAGAAGCG
GTGGGGCCCG ACGACACTCT ATACGGCATA CTAAGGCTTA GGATGCCCCA CGCCCCCAGG
CGCCCAGAGC TCAGCCGCAG GACGGCCCTA GTGAGAGAGT TGCATGTGTA CGGCCCGGCG
GTGCCCGTGG GGGAGAGGGG AATATGGTGG CAACACATGG GCATTGGGCG GAGACTCATG
GCGGCGGCAG AGGAGGTAGC CAGAGAATTC GGCGCGCGCA AGGTGGCTGT CATATCTGGC
GTGGGGGCGC GGGAGTACTA CAGAAAGCTT GGCTACGAGA GGTGTGGGCC CTACATGTGC
AAGCCCCTAG AGAAGCCGCT GGGGCATGCA GACGAGGAGC TCATAACGGT GTAG
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| Protein sequence | MRFIRAASGV HVVAVMTHPM PCPGRCTFCP TARDAPKSYL SDSPVVLRAK RSGYDPYLQT
AGRVKVYLEN GHVPSKVEVV VMGGTFSALP RGYREWFVAN VYKALNDYPN WAAKAAESPS
LEFEQLRNEA ALLRMVALAV ETRPDYVDEG EVDFLLQLGV TRVELGVQSI YDDVLAKVKR
GHGAREAAEA TALLKDAAYK VCYHLMPGLP GSDPDRDLEM FKTVFSDPAY MPDCVKIYPL
YVVPGTELYE QWRRGGYKSY DEETWLELLA KIYASVPRWA RVMRLGRDIP LHHVVDGPRW
GNMRQVVLKK MAEVGLPCVE IRCREVGVKL ANGAPVEPGP IEIKRAVYEA SGGVEVFLEA
VGPDDTLYGI LRLRMPHAPR RPELSRRTAL VRELHVYGPA VPVGERGIWW QHMGIGRRLM
AAAEEVAREF GARKVAVISG VGAREYYRKL GYERCGPYMC KPLEKPLGHA DEELITV
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