Gene Pcal_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0086 
Symbol 
ID4908353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp85025 
End bp85585 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID640123839 
Productmethyltransferase type 11 
Protein accessionYP_001054992 
Protein GI126458714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0770264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTGGG CCAGGAGGGC TAGAGAGGCC TACTTGGCCA TTGGGGAAGA GTACGAGGCC 
ACTAGGCGGC GCCCCCTCCC AGTGGCCGAC TTTGGAGAAC TTGGGCCACG GGCCCTCGAC 
GTGGGGGCAG GCCGCGGCGC CCAGCCCTTG TACATAGAGC TCGCTCACGG CTTTGTGGTA 
CACTGCGACT TGGATAGGAG GCTTCTGCCA GGGGGTGACT CCGTGGAGTG TGAGGCGACA 
CGGCTCCCCT TCAGAGACGG CGCCTTTGAC GTGGCCTACC TAGTGGCTGT CCTCCATCAC 
ATGCCCCGCG AGGCGGCTGG GGAGGCGCTT AAAGAGGCGA AGAGGGTCGC CCGGCGCGTC 
GTGGCCACTG TGTGGGCGCC GCCAAAGTGG CGGGGCCGCG AGGTGGGGCG GGGGGTGTGG 
GAAGTCCCCT GGGGGGATAG GGCCGTTAGA GTGTACTTCC AGTACGAGCT GGGCGACTTG 
GCGGAGGTGG CGCCGTCGCC GCCCCTCTCA ATGGGCATCT TGAGGAGGGG AAGGCAGTAC 
AACTTCTACA TACTCCTGTA G
 
Protein sequence
MEWARRAREA YLAIGEEYEA TRRRPLPVAD FGELGPRALD VGAGRGAQPL YIELAHGFVV 
HCDLDRRLLP GGDSVECEAT RLPFRDGAFD VAYLVAVLHH MPREAAGEAL KEAKRVARRV 
VATVWAPPKW RGREVGRGVW EVPWGDRAVR VYFQYELGDL AEVAPSPPLS MGILRRGRQY 
NFYILL