Gene Pcal_0084 details

Gene Information

• Locus tag: Pcal_0084
• ID: 4908317
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 81749
• End bp: 83788
• Gene Length: 2040 bp
• Protein Length: 679 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640123837
• Product: replicative DNA helicase Mcm
• Protein accession: YP_001054990
• Protein GI: 126458712
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1241] Predicted ATPase involved in replication control, Cdc46/Mcm family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 0.117672
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCTTGAGG TTGAGCTTGA CCTTCTGAGG GATAAGATTA GGGAGTTTAT TACGTCGAAT 
GAGAAGGTGT CGGACGAGGT CATCAACATG ATTATTCAGC AGAAGAAGTC GCTTGAGGTG 
GACTTCCACG ACATTTTGAT GTTTGACAAG GGGCTAGCCG ACTTGTTTAT CGAGAGGCCT 
CGCCTCGTCT TGCCCGAGGC GGACAAGGTG GTCAAAGAGG TGGTGGAGGA GAAGGACCCG 
GAGACGGCTA AGAAGCTCCG TAGGTTCTAC TTCAGGGTGA GGGGGTCGCC TCTGGTGGTT 
CCGCTCAGGA AGTTGAGGTC TGAGTACATT GGCCGCTTGA TTAGGGTGGA GGGGATTGTG 
ACTAGGCAGA CTCCGCCTAA GCACTTCCTC TACAAGGCCC TCTACCGTTG TACTCAGTGC 
GGCTACGAGA TTGAGCTTGT GCAAGAGCTG GAGCGGCACG TGGAGCCCCC GGCCAAGTGC 
CCCAGGTGCG GCGCGTCGAA GAGCTTCACT CTTGTGACTG AGCTGAGCCA GTACATCGAT 
TGGCAGAAGG TGATTGTGCA AGAGAGGCCT GAGGATCTGC CGCCTGGCCA ACTGCCGAGG 
AGCGTCGAGG TCGTCCTCCT GGACGACTTG GTGGACTCTG TGAAGCCGGG CGACATAGTC 
TCGCTGACCG GCATAGTGGA CCTCACCTTG AGCGAGCTGA GGAAGGGGAG GCCCCCCATC 
GTCACCTCCT ACATACAGGG GGTCCACGTG GAGACTACCA ACAAGGAGCT TGTGGAGGAG 
ATAACTAGCG AGGACGAGCA GAAGATCTTG GAGCTGTCTA GGAGGCCCGA CGTGAGGGAG 
CTCATAGTGA GGTCCATTGC CCCCTCTATA TACGGCTACG AGGAGATAAA GGAGGCCATC 
GCCTGCCTCC TCTTCGGCGG CAACGAGATA GTGTACCCAG ACGGGGTGAG GGTGAGGGGC 
GACATCAACA TACTGCTGAT AGGCGACCCG GGAACCGCCA AGTCTCAGCT CCTCAAGTTC 
GTGGCCAAGA TAGCCCCCCG CGCCGTCTAC ACCACGGGCA AGGGGTCCTC TGCGGCTGGC 
CTCACCGCGG CCGTGGTGCG GGACAAGCTC ACGGGGGAGT TCTACCTAGA GGCCGGCGCC 
CTCGTCCTCG CAGACAAGGG CGTGGCGGTG ATCGACGAGA TAGACAAAAT GGACGCCAAG 
GACAGGGTAG CCCTCCACGA GGCCATGGAG CAGAACACCG TGTCTATAAG CAAGGCGGGC 
ATCGTGGCCA CTCTCAACGC GAGAGCCGCC GTCCTCGCCG CGGCCAACCC GGCCTTCGGC 
CGCTATTTGC CAAACCGCAC TGTGGCAGAG AACATCGACC TCCCCGTCTC CCTCCTCAGC 
CGCTTCGACC TCATCTTCGT GATCAGGGAC GAGCCCCGGG AGGACTTCGA CTCTGCAGTG 
GCCGGCCACA TCTTAGACCT CCACTCGGGG AAGACGCCCG AGGCCTTTAG AGACGTCCTC 
AGGCCTGACT TCCTCCGCAA GTACATAATG TACGCCAGGA GGTACGTGAG GCCCATCTTG 
AGCGAGGAGG CAAAGGAGAG GATAAAGGCA TTCTACCTGG AGATGAGGAG GCGCTACCAG 
GGGCCGGGCA CGGCCATCGC CATAACTGCG CGCCAGCTAG AGGCGTTGAT ACGTTTGACC 
ACCGCCGAGG CCAAGATGCG TCTCTCCCCA ATAGCCACCG CCGAAGACGC CGAGAGGGCC 
ATACGCCTCT ACCTAGCCTT CCTAAAGTCT GTGGGCATAG ACGTGGAGTC CGGCGCCATT 
GACATAGACG CCATACTCAC GGGAGTCCCC GCGTCCCGCC GCGAGGCCTA CATACGCGTA 
GTAGAGCTGT TAAAGAAGCT GGAGGAGATC GAGAAGGGGC CAGTCAAGGT AGACCTCTTA 
AAGGCGGAGG CAGAGAAGCT CGGCATACCC GGCCCCGAGG TGCAGCGCAT AATCGACTTG 
CTCATACGCA ACGGCGAGGC CTACACCCCG AGGCCCGGCT ACATAAAGCG CGTAGCCTAG 

 

Protein sequence

MLEVELDLLR DKIREFITSN EKVSDEVINM IIQQKKSLEV DFHDILMFDK GLADLFIERP 
RLVLPEADKV VKEVVEEKDP ETAKKLRRFY FRVRGSPLVV PLRKLRSEYI GRLIRVEGIV 
TRQTPPKHFL YKALYRCTQC GYEIELVQEL ERHVEPPAKC PRCGASKSFT LVTELSQYID 
WQKVIVQERP EDLPPGQLPR SVEVVLLDDL VDSVKPGDIV SLTGIVDLTL SELRKGRPPI 
VTSYIQGVHV ETTNKELVEE ITSEDEQKIL ELSRRPDVRE LIVRSIAPSI YGYEEIKEAI 
ACLLFGGNEI VYPDGVRVRG DINILLIGDP GTAKSQLLKF VAKIAPRAVY TTGKGSSAAG 
LTAAVVRDKL TGEFYLEAGA LVLADKGVAV IDEIDKMDAK DRVALHEAME QNTVSISKAG 
IVATLNARAA VLAAANPAFG RYLPNRTVAE NIDLPVSLLS RFDLIFVIRD EPREDFDSAV 
AGHILDLHSG KTPEAFRDVL RPDFLRKYIM YARRYVRPIL SEEAKERIKA FYLEMRRRYQ 
GPGTAIAITA RQLEALIRLT TAEAKMRLSP IATAEDAERA IRLYLAFLKS VGIDVESGAI 
DIDAILTGVP ASRREAYIRV VELLKKLEEI EKGPVKVDLL KAEAEKLGIP GPEVQRIIDL 
LIRNGEAYTP RPGYIKRVA