Gene Pcal_0082 details

Gene Information

• Locus tag: Pcal_0082
• ID: 4909798
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 80442
• End bp: 81128
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 640123835
• Product: hypothetical protein
• Protein accession: YP_001054988
• Protein GI: 126458710

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.172183
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGTCGC TTGAGGTTCT GCTTCTAACG GCAATTTCGC TGATCATAAT GTTCGCGGCT 
CTGCCGTACG TCATTTCAAC GCTGTACGCC TCTATGGCGC CTCTGGAGTA TAGAAATGCG 
GTGGCCTACG TGCTAGCCTT TGCCGACGGG CTTGAGGCAG ACTTCGGGAT GGCGGGGTCG 
CGGAAGTACT TCCCCCTGCC CAACTTCGTC TACGGGAGCT TCGGCGGCGT CAACCGCACT 
TACGCCATCG CAATCCTCTG CGGCGGCACG CCGATTAGCG GGTACAGCAG ATGGAACGTG 
GTCGAGGTGT GGTACAACTC CACCTACCTA GTGGACGGGC CGCGCCTCTA CAGAGGCGTC 
GACGGGGGCT TGATAGCGCT CGTGGGGGAC ACCATGGTGG CCGTCAACGC CACTCCGCCG 
GGAAGGCTGA AGCTATACTT CAGACCCTTC GTGGTAAATG GCACGGAGGA AGTGTACATC 
TACTTCGTTT CGTCCAGGTT CTACGCCAGG GGGCGCTACT ACCTGACGTA TGAGGTAGGC 
GGGACGCTGG CGGTGGAGTC GTTACCGTGC AACAGCCGGC TTGAGATAAG GGTGAGCGAC 
GGCGTGCGGC AGTGGAGCTA TACGACGCCC AATGTGGTGA AGCGTGTGTA CTTTGTAAAC 
CAGACGGTGT GGATTGAGCT GAGATGA 

 

Protein sequence

MTSLEVLLLT AISLIIMFAA LPYVISTLYA SMAPLEYRNA VAYVLAFADG LEADFGMAGS 
RKYFPLPNFV YGSFGGVNRT YAIAILCGGT PISGYSRWNV VEVWYNSTYL VDGPRLYRGV 
DGGLIALVGD TMVAVNATPP GRLKLYFRPF VVNGTEEVYI YFVSSRFYAR GRYYLTYEVG 
GTLAVESLPC NSRLEIRVSD GVRQWSYTTP NVVKRVYFVN QTVWIELR