Gene Pcal_0081 details

Gene Information

• Locus tag: Pcal_0081
• ID: 4908133
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 77005
• End bp: 80445
• Gene Length: 3441 bp
• Protein Length: 1146 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640123834
• Product: hypothetical protein
• Protein accession: YP_001054987
• Protein GI: 126458709

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 0.24566
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGGGGCC AGCTGATACT CCTATCAGCC TTCATCGCCG CCGTGGCCGT GGCGGCGATA 
ATGACGGCGC AAATCGCCCT ACAGATGGGC TCCTACTCCG CGGGGGCGAG GACTGGGTAC 
GGCATATACG CAAAGGCGTG GCCCGAGGTG GTGGATCTCG CCGACTCCCA CGTACTCCAA 
GCCACGGCAA AGGCCTCCGC CCAGCTCTCA ACCGCAGCAA CCACCACAGG GCTCTACGCG 
TGGCTAAGCG ACCTTCCATA CTACGCAGCG AAGTGGTACA CCAACAGCTC GCTCTCGCTC 
CTAAAAACCG CGCTGTTGCC CATAGGGGCC CAGCTGGACT TCAAATACCG AATATTCTAC 
ACAGGCTTCA ACGGCACCCT GGGCCCCTAC CCACAGGCAG TGGAATACTC GCGGTGGAAC 
CTAGACCCCG TTAGGAGCGG CTTTCTCACA ATACCCGGCG CAACGCTCTA CAGGCTTGTG 
GTCACCTGGC AAAGCGACGA CTACGGCGGC TACTACGTCG TCACATACGG AGCCCACGTC 
TCTGAGCCAG GCGCCGCTGG CGAGGTATAC AACGTAGCCC TAGCAGACCT CTTGAGAAAG 
CTAGGCGAAT TGGAAGAAGA GAAAATCAAG TCCAGCCTCT TCGCCTTCCT AGTAGACAGC 
CAGACGTGCA AACTCTACCA GCTACCCTGG TGGGCCGAGA TAAAGAACTG CCCCCTCTGC 
CTACTACACG TCAGACTGCC CTCCTCTTCC TCCGACGAGG TGTCCGGCTT TAAGCTGGAG 
AAGGGCAAGG CGGTGGAGGT GCTCCTCGTC TTCATTCCAA ATCTGCAAGG CGACGAGATA 
CCGGTGCTGA AGTCTGGCCC ATGTGCGAGC GGCCAGCCTA TGCTGTCAGA CATCGTGAAG 
GTGAACAAGG CCGTGAACAA TGAGCCAAAG GCTGCGTTCG CACCGCAAGT AGGATACGAG 
CAGTATCCGT GGGGCGGCCG TCCAGCGGGG TACAGCGTTT CATACTACTG GGGCGCCGAC 
GAGATAGCCT CATGGGGCAA AAGCGTAGTT AATACGCAAG GCTGTTATCA TTCGCCAACG 
GGCGGAGTAA TTAGAAATGA GTATGGTGTT ACGGTGGAAG ACGTCCCAGA CTTCCGCCCC 
GTTGCACGAG TCTACGCCAG GTACGCCGTT GGCACCACGA ATTGGGCCTT TAATGTATAT 
TACAAATTGA ACACTCCACA AGAAGATGAT GATGATAATC TGAGAAATCT TGGCTGGCGT 
GGCTTCACAG TGGAGGCGCT GGTCAAGCCG CTTAAAGGCA TAATAAGGCC CGCCAGGCTT 
GACCTCTACT ATGCCTGGAA CACCAACCCA CCCCCACCCA GCAGACACCC CATATGCGCC 
TACCTTCTGG CAGTGCAGGC CGTTGTGCCA GCCATCGTGT GGACAAACTG GTACGCGGGG 
AACGGCGTGT GGAACGGGAG GACTTGGGAT GATGCGGGTT CGCTAACTTA TGGCACATCC 
TGGTACCTCT TCTCCATATC GGCGGACACC TCCAGAGTGG TATACAGCGT ATACAGCTAC 
AACACGACAA GGCCCCTCAT ACGGCTGGCC ACTAAGACGA CCACCCACTC GTTTGGCGGC 
GACTGGAGGT TCTACATAGT GCTGGGAAGC GCCATAGTGG ACAATCCCGC CTCCGGTACG 
CCTGAGGAGG CGTACTACGC CTATGTGAGA GTTAGGCCCT GGGTAGACCC GCCCCCCTCC 
GTGTCCCTCG CGCCCGTGGA CAAGACCCCC CTCGCCAGGC CGGGCAGAGT AGACGTGGTA 
GCACTGAGCG CAACCAAGGT GGAGGCAAAC ATAAACGCCA GCGGCAGTGT GGGTCTTGCC 
AACGTAGAGC GGCTCAACAT TTCGCGCACA ATAGGCCTAA GCGTCAAGGT GGTTGAGTGG 
AGCGTCGATG GGAGCAACCC CAACCAGGAC AGATACCACT ACAGAGTTCG GGTGGAGTCC 
ACTATCCCCC GCGGCGCCGT GGCGGCCCAG TTCACCCTCT TCTACAGCCT GGGCTCCACC 
TACGTCAACA CCACGTGCGT CGACAACGGC TTGTGCACAG CCACACTGGC TGAGTACCTC 
GGCTACTCCG GCGGCAGGGA TGTCGCCGAG TGGGAGGTGG AGTTCACCGT GCCCAAGAGG 
GCGAGCCACG CCATATTTGT CAATGTCTTC GGGTCTAAGG TGGCTGTCTC CACGGCCCAG 
CCCAAGCTCT ACGCGCTGGG AGGCGGCACG ACGTGGTACC TCATAAACGA GGGAGACGGC 
ACCGGCGTCT TGTACATACC GTGGAAGAAG TCTGGCCAGC AGGTTTGCAC GCGCTGGCTG 
GCCGACTACA GCCCCAAGGA CCCGAGGTTC ATAGGCGTTT ACGACGTTAA GTACAAGTGT 
CCCAACTGCG GCCCGTGCGA GAGCTGGACA GTCGTCCTCG TACCGCCTGG CTCGCTCGTG 
AGGCTAGACT TCACAGACTC GGTGTCACTC AGCGTCTTGA ACACGTTTAG AGCACAGTGG 
CAACCGCCGA TTTTGCCGAC ACCGCCGCTA CCAAGCTGTC CTAACCCTAT ATACGTCAGA 
TTCTACATAC CCGGCAACGC CAGTAAGGGT TACTATGTTA TTTACGTACC GCCAAGCGAT 
ACGCAGGGCC CGCTTCTCAC GTACGGCGGC GTAGATAGGC GTAGTGCTTA TGCATATTTA 
GGCGGTAGCT GGAAGGGGGT GAATCTCTAC AGAGATGGGC CAAGCGGCGT TGGCGGATAT 
TGGGTCAGAC TTGAGGGGGA TTTGACTAAC AAAGCCGTCT TAGCGGTCTT CTGCCAAGGA 
GGGACATTTA CGCCTCCTCA AGACCTCTTT AGGCCTCCCC AACAACCCTC CAGCTACTTC 
TGGACGCTCA CTGGCCCTGT GGAAGTCACC TTACAACAAG CATCGCTGAA TGAGTTCAAA 
GACGGGTTCA CCGTGGTGTT TGGCCACTAC AGGAGTGTGC CGAGTTGGGT GGCTCTGTAC 
AACGGAACTT GGTCGGACTC AATGCTATCG TGTGCGTCTA ACAGGAGAAT GGTGGGCATA 
CAGCAAATTG GCAGTCCAAA GTGGTGGTGG GACTACGACG GCTTCTGCTA CGACAGGCAC 
ATATGGGAGC TCTACGGCGC CGTGAGTGGC GAGCGCAACT TCACAATATC GGTGGCCAGG 
TCCGTCGTGT TGTACCAGAT CTTCACGAGC GGCGCGTGGG GGTCGGGGCA GAACCCGTGG 
CTTAGGTCTT ACCCCAACGT CGTGCCGTCC GACGGGCCGT CAGACCTCAG AAACAGGGCC 
ATGACGGCGT TTCAGAGGGC GCGCGCCGGG GTCGCCGGCG GGCAGAGATA CAGCGTTGCG 
GTTATACCCT TCACGTGGCC TCGGCCGTTC TTCTACGTGG ACTCTGGCAC AGCGGTTAGG 
GGCCCGTTTG AGACGACATG A 

 

Protein sequence

MRGQLILLSA FIAAVAVAAI MTAQIALQMG SYSAGARTGY GIYAKAWPEV VDLADSHVLQ 
ATAKASAQLS TAATTTGLYA WLSDLPYYAA KWYTNSSLSL LKTALLPIGA QLDFKYRIFY 
TGFNGTLGPY PQAVEYSRWN LDPVRSGFLT IPGATLYRLV VTWQSDDYGG YYVVTYGAHV 
SEPGAAGEVY NVALADLLRK LGELEEEKIK SSLFAFLVDS QTCKLYQLPW WAEIKNCPLC 
LLHVRLPSSS SDEVSGFKLE KGKAVEVLLV FIPNLQGDEI PVLKSGPCAS GQPMLSDIVK 
VNKAVNNEPK AAFAPQVGYE QYPWGGRPAG YSVSYYWGAD EIASWGKSVV NTQGCYHSPT 
GGVIRNEYGV TVEDVPDFRP VARVYARYAV GTTNWAFNVY YKLNTPQEDD DDNLRNLGWR 
GFTVEALVKP LKGIIRPARL DLYYAWNTNP PPPSRHPICA YLLAVQAVVP AIVWTNWYAG 
NGVWNGRTWD DAGSLTYGTS WYLFSISADT SRVVYSVYSY NTTRPLIRLA TKTTTHSFGG 
DWRFYIVLGS AIVDNPASGT PEEAYYAYVR VRPWVDPPPS VSLAPVDKTP LARPGRVDVV 
ALSATKVEAN INASGSVGLA NVERLNISRT IGLSVKVVEW SVDGSNPNQD RYHYRVRVES 
TIPRGAVAAQ FTLFYSLGST YVNTTCVDNG LCTATLAEYL GYSGGRDVAE WEVEFTVPKR 
ASHAIFVNVF GSKVAVSTAQ PKLYALGGGT TWYLINEGDG TGVLYIPWKK SGQQVCTRWL 
ADYSPKDPRF IGVYDVKYKC PNCGPCESWT VVLVPPGSLV RLDFTDSVSL SVLNTFRAQW 
QPPILPTPPL PSCPNPIYVR FYIPGNASKG YYVIYVPPSD TQGPLLTYGG VDRRSAYAYL 
GGSWKGVNLY RDGPSGVGGY WVRLEGDLTN KAVLAVFCQG GTFTPPQDLF RPPQQPSSYF 
WTLTGPVEVT LQQASLNEFK DGFTVVFGHY RSVPSWVALY NGTWSDSMLS CASNRRMVGI 
QQIGSPKWWW DYDGFCYDRH IWELYGAVSG ERNFTISVAR SVVLYQIFTS GAWGSGQNPW 
LRSYPNVVPS DGPSDLRNRA MTAFQRARAG VAGGQRYSVA VIPFTWPRPF FYVDSGTAVR 
GPFETT