| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0080 |
|---|
| Symbol | |
|---|
| ID | 4910041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 76568 |
|---|
| End bp | 77008 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640123833 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001054986 |
|---|
| Protein GI | 126458708 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.333007 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGGG TAATAGAGCT GGGCCTCTCG GCAATGGTCG TGGGCCTTGT GTTCTACGTA
GTATCCGCTG CGGCGCCGGC CCCAGCGTAC ATAGCCGCGG AGCGGGAGGT CACAGCCAAC
GCCTACTTCA TACTCCTCAG GCTGACCGCA GACCCCCACT TCATGAGCGC CCTGGAGAGG
GCCGTGTGCC AAAACGACAC GAAGGCGGTG GCCGCCATGT TGAACGCCAC AATCCCCGTG
CGGTACTACT ACAACTTCAC GGTGTACCTA GACGACGAGA GGCCGCCCTC CTGCCTCGCG
TGCGCCAAGT GGTCCCAGAG GCTTGCCACC GCGTCCAGGC CACGAGGCCT CCCGCAGAGC
GGCGCCAGCG TGGCCGCCGT GTCGGCGCTC CTCAGCGACG GCACGAGGGT AAGGCTGACT
CTCTCGCTGG ATAGGCCATG A
|
|---|
| Protein sequence | MKWVIELGLS AMVVGLVFYV VSAAAPAPAY IAAEREVTAN AYFILLRLTA DPHFMSALER
AVCQNDTKAV AAMLNATIPV RYYYNFTVYL DDERPPSCLA CAKWSQRLAT ASRPRGLPQS
GASVAAVSAL LSDGTRVRLT LSLDRP
|
|---|
| |