Gene Pcal_0076 details

Gene Information

• Locus tag: Pcal_0076
• ID: 4910017
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 70539
• End bp: 71090
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640123829
• Product: PaREP1 domain-containing protein
• Protein accession: YP_001054982
• Protein GI: 126458704

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.470948
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTACGAAG CCATAGAGAG ACCTCTTCCA AAGCCCTCCT CCGCCGACTA CGCCTCTGCC 
CGCCTACTCG AAGCGTTGGT GGAGACCAAG CTTGCCATTG ACTTCCTCAG ACGCGGCCTT 
ACTCGCAACG CGGCTGGAAA GGCCTTCCAG GCGTGGAGGA CTGTGCTGGC GGTCCTCCTC 
AAGCTTGAGC TAGAGCGGCT GAAGGCCTTG GCAAAGACAG AAGAGGAGAG GAGGTGGCTA 
GAGGAGAGGG CGGTGCCCCG AGTCCCCACT ACGAAGATGA TACCGCTTTC GCAGATGTTG 
AGAGAATTGG GGTACCGAGA TGTGTCTGCG TGGACGAATT TGGCGCTAAA TCTCCACGAC 
TACCAATACC ACGGACCAGA CCCAGACATG GCGTTGATCA AGTACCGCAC AAGGGAGGAG 
GCGGCGAGGG CAGTGGTAGA GCTTGTATCA GCCGTGGTTG ACTATGTGCA ACGCTTGAGG 
GAAAAGGTGC AGTTTAGTGA GGAGGTTGAG AAGGCGCTAG AAGGCGTCAG GGCTGAGTTG 
GCTGTATTGT GA 

 

Protein sequence

MYEAIERPLP KPSSADYASA RLLEALVETK LAIDFLRRGL TRNAAGKAFQ AWRTVLAVLL 
KLELERLKAL AKTEEERRWL EERAVPRVPT TKMIPLSQML RELGYRDVSA WTNLALNLHD 
YQYHGPDPDM ALIKYRTREE AARAVVELVS AVVDYVQRLR EKVQFSEEVE KALEGVRAEL 
AVL