Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0070 |
Symbol | |
ID | 4909596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 65872 |
End bp | 66549 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640123823 |
Product | hypothetical protein |
Protein accession | YP_001054976 |
Protein GI | 126458698 |
COG category | [S] Function unknown |
COG ID | [COG4021] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.979925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATATTA ATGTGGCCCA CGTCGTCTCT ACCCTGGTAA GACTAAACCC AAAGGCCCTC GAAGCCTCGT ACCGAGAACG CGAGGCCGTA TGCGAGCCCG CGGCGCCCCC CTTCGCCGTT AGACTAGACG GAGTTGGATT TGGCAAACGT CTAAGGGACT TCCCACACCC CCGGAGCAGG GTTGTACACG AGGCTCTGGT AGATACTGCA AAAACGCTTG CGGCTACGTA CGGCGCAGAG CTTGTACACG TGGTAAGCGA CGAGATAAAC CTAATTTTCC TGGGGCAAGC CCCCTATGGG GGGAGGACGT TCAAGATAGT GAGCGTGCTG GCGGCACACG CGGCCTCTGA GCTCACCGCC AGACTCGCCA GGCCGTTGCA CTTCGACGGG AGAGTGATAA GGCTAAGAGA TAGGTGCGAT GCCGCGACAT ATGTCTTGTA CAGGGCGAGA GTCGGGCTAA ACAACTACGT GGTCCAGTTG GCCAGAGGAG CTGGGCTAAT CAATTCACAT ACGCCGCATA TAGAGGAACT CCTCCCCAAG GTCGAAATTG CGGACTTTGA GCTGGCGTGG GGGTCGACCA TGAAAAAGGA GGGAGGTTAT AGGCGAGAGG GGCTATGCGA GGCGTTGGTT GCCCTATGCG ATGTATGTAC TAGCGGTACT TCTCCTCGAG GTATTTAA
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Protein sequence | MYINVAHVVS TLVRLNPKAL EASYREREAV CEPAAPPFAV RLDGVGFGKR LRDFPHPRSR VVHEALVDTA KTLAATYGAE LVHVVSDEIN LIFLGQAPYG GRTFKIVSVL AAHAASELTA RLARPLHFDG RVIRLRDRCD AATYVLYRAR VGLNNYVVQL ARGAGLINSH TPHIEELLPK VEIADFELAW GSTMKKEGGY RREGLCEALV ALCDVCTSGT SPRGI
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