Gene Pcal_0060 details

Gene Information

• Locus tag: Pcal_0060
• ID: 4908559
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 58394
• End bp: 58972
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640123813
• Product: abortive infection protein
• Protein accession: YP_001054966
• Protein GI: 126458688

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCACGG CTGTAGTGGC GCTGTTGCCT CCCTTGGCGC TAATGGCGGG AGGCGTCGCG 
GCCATGTATA CGCCCAAGTG CGGCCTCGCC GCCGCGATAA CTGTTGCGTA TCTAGTAATG 
ACGCCGCTGG CCTACTACGC AAGGCCGTAC GTGGCGAGAA ATTTAAGGCA TGTGGCAGTG 
GCGGCGTTTT CCATGGCCGC TTTGTGGGCG CTACAGTACG CACTAGCACC TCTCCTCAGC 
CAGTACGACG TGACCAATCT CATAGTGTCA ATGCTTTCCA CATGCGACAA GTGGAAAATA 
TACCTCACGC TTTCGGCCAT TGTCTTAGCC CCAGCGGCGG AGGAGGCGCT GTTTAGAGGC 
ATCCTTTTCC AAGAACTAGA GAAGAGGGCG GGGCTAGCCG TGGCGTATGT GGGAAGCGCG 
CTTGCATTCG CCGCGGCACA CGGCTTTCCA GCACTAATCC CGTTGTACTT CGCCTACGGC 
CTCGTCTTAA CACACGCGTT CAGAGGTGGC GGCTTCCTCT TCGCAACCTT GCTACACGGG 
GTAAACAACC TCTTGGCCCT CTACCCTATA TTACAATAA 

 

Protein sequence

MRTAVVALLP PLALMAGGVA AMYTPKCGLA AAITVAYLVM TPLAYYARPY VARNLRHVAV 
AAFSMAALWA LQYALAPLLS QYDVTNLIVS MLSTCDKWKI YLTLSAIVLA PAAEEALFRG 
ILFQELEKRA GLAVAYVGSA LAFAAAHGFP ALIPLYFAYG LVLTHAFRGG GFLFATLLHG 
VNNLLALYPI LQ