| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0058 |
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| Symbol | |
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| ID | 4908205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 56641 |
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| End bp | 57573 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640123811 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_001054964 |
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| Protein GI | 126458686 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTCG CTGTGGTGGG AATAGGGGGT TGGGGGAAGA ACCACCTCAG AGTCGTAGCA
CAGCTCAGGG GCGAGGGGCT TGTCGACACC GTATACGCCG TGGACATAGA CGAGACCAGG
CTACGGTGGG CCGAGAAAGT CTACGGCGCA CAGGCTGTAA GAGGTGTGGA GAAGGCCGCC
GACCTCGACG TAGACGCCGC CATAGTGGCA ACTCCCACGA CGCTGCACGC GCGCCACGCC
GCACTCTTTC TCTCAAGGGG CGTGCCCACG CTGGTGGAAA AGCCATTCAC TGCGACGTTA
GGCGAGGCCT ACGAGCTACT GGACTTGGGC AAGAGGACCT TAGTCACCAC GGGGTACCTC
CTCAGATTTC ACCAGGGAGT TCGCTACGTC AAGGCGAATT TGTCTAAGCT GGGCCGCTTC
CTCTCTGCGT ATGGGAAAAG GACGTCTCGT TGGCCAATAA GGCCAGGCGA CGTCGGCGTA
ATAAAAGACC TAGCAATCCA CGACATAGAC CTCGTGACGT ACATCACGGG GGAGAGGGCG
AGGGCGGTAT ACGCCGCGGG GGGCTCCACG AGGGGGCAAT ACGAGGACCA CGCCCAGATA
TTTGGACAAT ACGGCGGCTC CTCGGCGATA TTTGAGGCCA ACTGGCTTAC GCCGTACAAG
TTTAGGCGGA TTGAACTGAC GGGGGATCAG GGCATATTTG TAATAGACTT TGTCACAGAC
GAGGTCTACT TCTACGGCGA AGACGGCGTA TATAGGCCCA GGCTTGAGGT CGCCGAGCCC
CTCCTACTGC AAGACAGAGA ATTTCTGCTG GCAGCCTCTG GCAAAGGCGG AGAGGTCGTC
GCAGTAGAGG ACATCGTCTA TACATTGAAA TTGTGCGAGG CGGCCGTTGT CTCTATTAAG
ACAGGCAAGT TAGTGGGCTT AGACGAAGTA TAG
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| Protein sequence | MRVAVVGIGG WGKNHLRVVA QLRGEGLVDT VYAVDIDETR LRWAEKVYGA QAVRGVEKAA
DLDVDAAIVA TPTTLHARHA ALFLSRGVPT LVEKPFTATL GEAYELLDLG KRTLVTTGYL
LRFHQGVRYV KANLSKLGRF LSAYGKRTSR WPIRPGDVGV IKDLAIHDID LVTYITGERA
RAVYAAGGST RGQYEDHAQI FGQYGGSSAI FEANWLTPYK FRRIELTGDQ GIFVIDFVTD
EVYFYGEDGV YRPRLEVAEP LLLQDREFLL AASGKGGEVV AVEDIVYTLK LCEAAVVSIK
TGKLVGLDEV
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