Gene Pcal_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0057 
Symbol 
ID4908426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp56186 
End bp56644 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content55% 
IMG OID640123810 
Producthypothetical protein 
Protein accessionYP_001054963 
Protein GI126458685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTACGC TTCCAGTAGA ATACCTCCGC ACAACTAGGC TCTTTAGGGA GAAGGCCGGC 
GATGTCGAAA TCATATCCTT CGAGGTGCCT ACCCACAAGT ACTTCTCCAG GGGCGAGGTG
CCCTACCTCG CCACCGCGCT TGACGTAGAT TTGAGGAAGC TTGAGAACAT GATTTCAGAC
ATGAAGTACG GCCGCGTGGC GGTGGAGAAG CTCTGGGCGT ATAGGCTCGA CGGCGACATG
ATCAGAGAGA GTAAGAAGGT GTTGTTGCCC GACTTGGCGA GCAACCCCGT AGACGGAGAG
GTGGAGGAAT ACGAGGACTT CAAGGTGTTG AAGATACACG TGGGCTCTCT AAGGGAGCTG
GTACGAATCT ACGTCAGACA GCGGCCCTCG TTTAAAGAAG TAGTGGTGTA CAGAAGGCCG
CCTCACCCGG CTCTGGTGAG ATACGTGGCG TACTTATGA
 
Protein sequence
MATLPVEYLR TTRLFREKAG DVEIISFEVP THKYFSRGEV PYLATALDVD LRKLENMISD 
MKYGRVAVEK LWAYRLDGDM IRESKKVLLP DLASNPVDGE VEEYEDFKVL KIHVGSLREL
VRIYVRQRPS FKEVVVYRRP PHPALVRYVA YL