Gene Pcal_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0056 
Symbol 
ID4910119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp55670 
End bp56164 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content60% 
IMG OID640123809 
Producthypothetical protein 
Protein accessionYP_001054962 
Protein GI126458684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGATACT TAGTCCTAGG CGTAGTGGAC GGCCTAATTA CTGCGGGCAC TCTCTCTGCC 
ACGCTAATTT TTAGGGGAGG CGGCATAGGC CTAGACCTCT TGGTGTCGCT GGCTGTGGTA
GTGGCTTCGA TAAACGCGCT TACGGTCTTC GTAGCGGAGT TTGTTCAACA GATGCAAGAG
GTCAAAGAGG TCGCCTACAA GGTCTCTCTG AGGGAGGAGT GGCTTAGGTG GTCTCTTTTG
CACACCCGTG CGCTGTACGC CACGGCCAAG TCGTCCGCGT TCGCCTTCGT CTCCTCTCTG
GCTGGGGCGC TGGCCGTCTT AGCGCCCGCT GCCGTCTTTC CGCCAGCGGC CCCCCTCGCC
CTTGCCCTGG CTGTGTTGGT CGTGGGCGCT TTTCTAGCGG AGTCGTGGGG AGACTTCGCC
TGGGTGGTGG GGATGATCGC CTTGGCGGTG GCTGTGGGAG TGGCAGTGGG GCTCGCCTTC
CCAGTAATTG CTTAA
 
Protein sequence
MRYLVLGVVD GLITAGTLSA TLIFRGGGIG LDLLVSLAVV VASINALTVF VAEFVQQMQE 
VKEVAYKVSL REEWLRWSLL HTRALYATAK SSAFAFVSSL AGALAVLAPA AVFPPAAPLA
LALAVLVVGA FLAESWGDFA WVVGMIALAV AVGVAVGLAF PVIA