Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0045 |
Symbol | |
ID | 4908914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 48102 |
End bp | 48638 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640123798 |
Product | hypothetical protein |
Protein accession | YP_001054951 |
Protein GI | 126458673 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTCG ACGTCGCATA CCTAGCCCTA GGCGAGTTGG AGAACTTGTT GAAGCAGTAC GACGAGAAGC TCAAGGCCAT TGAAGAGGCG TGGAGGGCGT TCGTGGACTC TGCCACAAAG GCCAAGGCCA GTTGGGACGC CGACTTGCCC AAGGTCAAAA TACGCGTCGA CCAGCTCCGC AACGTGGTAG ACAGCTTAAA GAAGGAGATG GAAGTCCTCT TGGCCAAGAA GGAGCTGGGC TTAATCTCGG AAAGGGACTA CGCAACCCTC TCCGAGGAGT TGCAGAAGAA GATAGACGAG CTGGAGAAGC GGCTAGGGGA GTTCACAGAG AAAATCGCCG AGGTCGAGGG CAGAGTGAGA TACCTCTGGG CCAGGGCCTT GACGCGGGAG TATTTAAGCA AATTTGACCT GGTGGAACTT GAAAAGAGGA TAGAGGATGC AAAGGCCGCG GGGAAAATCG ACGATGAGAC TTACGCAAAG ATGAAGCAAG AGCTCGCCGT GATGAAAAGT GCTTGGGAGT TTCTAAACCT CCTCTAA
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Protein sequence | MSLDVAYLAL GELENLLKQY DEKLKAIEEA WRAFVDSATK AKASWDADLP KVKIRVDQLR NVVDSLKKEM EVLLAKKELG LISERDYATL SEELQKKIDE LEKRLGEFTE KIAEVEGRVR YLWARALTRE YLSKFDLVEL EKRIEDAKAA GKIDDETYAK MKQELAVMKS AWEFLNLL
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