Gene Pcal_0044 details

Gene Information

• Locus tag: Pcal_0044
• ID: 4908706
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 47383
• End bp: 48105
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640123797
• Product: hypothetical protein
• Protein accession: YP_001054950
• Protein GI: 126458672

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGTTT GTCCGGCGCT TAGGCGTGTA GAAGGCGGCT TTGTGTGTAG CTATAACAAC 
AAGCCCATAG ACCCCTTCAG CTGGTATTGT ATAGGCAACT ACACCGAGTG CCCCATCTTT 
ATTAGGTTTT CTCGCGAAGT CACCAAGCCC GCGGCTCCTC CAGAGGCGGC GCCCAAGCCG 
CTGGCCGATG TGCTCCCCCT AGCCGCCGAG CGGCCCAGTG GAGAATTTGA AAGAGCCATA 
AAGCCTGTCA TTGACAACGT GATTTTGAAA TTCGACGACC TCGTCAAAAA ACTAGACGGC 
GCGTGGAAGG AGTACGAGGA AAACGTGGTG AACATCAGGA GGCAGTGGGA GGTGGAGAAG 
ATGTCTCTGC TCAGGTCGCA GGAACTCCTC AGTAGGACAA TCGCGGAGTA CGAGAAGAGG 
TTGGCGGAGC TCGAGCTAAA GAGGGACTTC CTACCCCCAG AGGCCTACGA CCAGCTGAGG 
AGAGACCTCG AGGAGAAGTT GGCCTCTCTC CGCGCCCTCC TCGACGAGGT GAAAGCCAAG 
TACGACGCCC TAGAGGAGAG CCTAGGCGTC CACTTCAGGC GGGTTCTCTC CACTTCGACA 
AGCGCAGAGG TCATATCGCT TAAGCTGTCT CTCTCCAAGC TGGAGGAGCT TCTGCAAGAG 
GGGAAGATAA GCAGAGAAAC CTATGAAAGA CTTAAGAAGG AGCTTGAGGA GTTGATGAAA 
TGA 

 

Protein sequence

MSVCPALRRV EGGFVCSYNN KPIDPFSWYC IGNYTECPIF IRFSREVTKP AAPPEAAPKP 
LADVLPLAAE RPSGEFERAI KPVIDNVILK FDDLVKKLDG AWKEYEENVV NIRRQWEVEK 
MSLLRSQELL SRTIAEYEKR LAELELKRDF LPPEAYDQLR RDLEEKLASL RALLDEVKAK 
YDALEESLGV HFRRVLSTST SAEVISLKLS LSKLEELLQE GKISRETYER LKKELEELMK