Gene Pcal_0035 details

Gene Information

• Locus tag: Pcal_0035
• ID: 4909789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 39984
• End bp: 40568
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640123788
• Product: AMMECR1 domain-containing protein
• Protein accession: YP_001054941
• Protein GI: 126458663
• COG category: [S] Function unknown
• COG ID: [COG2078] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTTGGAC AGCTCTTGGT CTCACACGCC CGTCTCTCCA TGGTTCACAA GCTCCGGGGC 
CTCGCACTTC CCGAGCCGCC TGAGGCCCTC CTAGGCCTTA AGTACGGTGT GTTTGTCACT 
GTGGAGGGGA TTGTGAGGTC CGGCGGCTAC GAGAGGCGGG AGGTGCGGGG CTCGCTTGGC 
ACTGTCTTCC CAATGCAAGA CTTGGGGCAC GACGTCGCCC GCATAGCGGC TAGGCTCGCC 
GTATCTATCC CACGCTTCAC CGAGTTCGAC CTGCGCCGCT CTGTCGTCGA GGTAACTCTC 
GTAGAGGGCC TCTCGGAGTG GGACGGCGAC CTGTCTAACT TCGCCTGGGG TCGGGAAGGC 
GTGTATGTGG AGGCTGGGGA GCGGCGCTTT GTCGTCCTCC CCCAGACTAT CATTGAGCGG 
AGGCTGTTCG GCGAGGCGCT CCTCCGCTAC GTGGAGTCCA TGGGCGGGGC GGGGGGCACC 
CTTTACAAGT TCTCTACCAG AATTTTCTAC GAGGTTAGGC CCGAGGGGGA GGTAATTGAG 
CGAGAGCTGT GGAAGTCGCG TGTAATAAAG CAATTTGTGC GTTAA 

 

Protein sequence

MLGQLLVSHA RLSMVHKLRG LALPEPPEAL LGLKYGVFVT VEGIVRSGGY ERREVRGSLG 
TVFPMQDLGH DVARIAARLA VSIPRFTEFD LRRSVVEVTL VEGLSEWDGD LSNFAWGREG 
VYVEAGERRF VVLPQTIIER RLFGEALLRY VESMGGAGGT LYKFSTRIFY EVRPEGEVIE 
RELWKSRVIK QFVR