| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0029 |
|---|
| Symbol | |
|---|
| ID | 4909709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 21253 |
|---|
| End bp | 22623 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640123782 |
|---|
| Product | pyruvate kinase |
|---|
| Protein accession | YP_001054935 |
|---|
| Protein GI | 126458657 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0469] Pyruvate kinase |
|---|
| TIGRFAM ID | [TIGR01064] pyruvate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGG CCTCTGCAAA GCCGCTTACG AAGAGAGTTT TGACGCTGGG CCCGGCGACC
GACGCCTTGT CGATAGGCGA GGTGTTCCGC TTCTTAGACT TGGCAGACGG CGTTAGGATA
AACTTGGCAC ATGCCACCCC CGGCGAGGTA GAGGCGCGGG TGCGGACGGT TAGGACCTAT
GAGGCAGAGA GGGGGCGCCC CCTGGCCCTC GTCGTAGACT TGAGGGGGCC AAGCGTCCGA
GTTGGAAAAA CGCCTCCAAT AAGCGTGGAG AGGGGGCAAG AGGTGGTATT TAAGCCTGGA
CGCGAGTCCG ACGGCAGTTT TATACCAGTG CCAGAGCTCT TCTTCGCGGT TGTAGAGCCT
GGCGATGTGG TCTTAATGCT TGACGGCAAG TTGAGGATGA GGGTCGTCTC GGCGGGGCCC
GGCGCCGCTA GGGCGTTGGC TGAGTCGAGC GGCGTTGTTG AAAGCGGCAA GGCTGTGGTG
ATTGAGGGCA AGGACTTCGA TCTGCCCTCG CCCACCGACG ACGACATAGA GACACTACGG
GGGATTGCCC ACCTCGCCCG CGAAGTGGAT TACGTGTCTG TGAGCTTGGC CAGGGGCTGT
GGAGATGTAG AAAAGGCGAG GGCTATCTTG AGGGAGCTTG GGTTTGAGAG CCAGGTGGCG
GTCAAAATTG AGACAAGGCG GGCCGTCGAG GCGTTAGAGG AGTTGGCCCA ATGTGGCGAC
TACTTGGTCG TGGCCAGGGG CGACTTAGGC CTCCACTACG GGCTTGAGTC TCTGCCCGTT
GTACAACGCA GAGTTGTCTA CACCGCGCTG AGGCTGGGGA AGCCAGTCGC CGTGGCCACA
CAACTGTTAG ATTCCCTCCA GAGTTACCCA ACGCCCACAA GGGCCGAGGT CAACGACGTG
TTCACGACTG CCTCCATGGG AGTTGACAGC GTTTGGCTTA CCAACGAGAC CGCCAGCGGG
AGATACCCCA TTGAGGCTGC CAGCTGGCTT ACAAAAATTC TCAACGCGGT GGAGTACCAC
GTGCCTCAGC GCCCTCTCCC CAATGGCGTG AGAGATAGAT TCGCAAAAGC GCTTGTAGAA
CTGGCAGAAG ATCTTGGGGC AGACATCCTC ATATACAGCA TGAGCGGGGC GCTGGCAAGG
CGAGTGGCCA AGTTTAGGCC TCTGCAGCTT GTCTACGTGG GCACTCCAAG CATGAAGACT
GCACGTGCGC TGTCGGTGGT GTGGGCTTTA GAGCCCCACC ACATACCCGC CCCCAGCTAC
GAGGAGGGGC TCGCGAAGCT TATAGCCATG AGGGGGAAGG CGCCTTATGT GGCCACATAT
GGGATAAGAG GGGGCGAGCA CGTCATTAAG TTATTTATAG AAGAGGATTG A
|
|---|
| Protein sequence | MGKASAKPLT KRVLTLGPAT DALSIGEVFR FLDLADGVRI NLAHATPGEV EARVRTVRTY
EAERGRPLAL VVDLRGPSVR VGKTPPISVE RGQEVVFKPG RESDGSFIPV PELFFAVVEP
GDVVLMLDGK LRMRVVSAGP GAARALAESS GVVESGKAVV IEGKDFDLPS PTDDDIETLR
GIAHLAREVD YVSVSLARGC GDVEKARAIL RELGFESQVA VKIETRRAVE ALEELAQCGD
YLVVARGDLG LHYGLESLPV VQRRVVYTAL RLGKPVAVAT QLLDSLQSYP TPTRAEVNDV
FTTASMGVDS VWLTNETASG RYPIEAASWL TKILNAVEYH VPQRPLPNGV RDRFAKALVE
LAEDLGADIL IYSMSGALAR RVAKFRPLQL VYVGTPSMKT ARALSVVWAL EPHHIPAPSY
EEGLAKLIAM RGKAPYVATY GIRGGEHVIK LFIEED
|
|---|
| |