| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0028 |
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| Symbol | |
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| ID | 4909872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 20428 |
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| End bp | 21273 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640123781 |
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| Product | hypothetical protein |
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| Protein accession | YP_001054934 |
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| Protein GI | 126458656 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1355] Predicted dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATTA GAAAGCCCGC CGTAGCCGGT TACTTCTACG AGTCGAGGGC CGACGAGTTG
CAGGCGCGGA TTGAGTGGTC TATTAAACAC GAGATTGGGC CCAAGGCCCC CGTCTTGCCT
AAACTCGGGA CCGAGGCCCT AGGCGGCGTG GTTCCACACG CCGGATATAT GTACTCAGGG
CCTGTGGCCG CGTGGCTGTA CTCGGCCCTG GCAGGTTACG GCGCGCCCAC AACCTTCGTT
ATCATTGGCC CAAACCACTA CGGCATAGGC GCCCCCGTGG CAATTATGAA GTCTGGGGCT
TGGGAAACCC CCTTCGGCCG TGTGGAGATA GACGAAGAGC TCGCCTCGCT GATAGCGTCG
AACTATAGGG AGATTGAAGA CGATGCCCAC GCCTTTTCTA AGGAGCACTC AATCGAGGTA
CAGTTGCCGT TTATCCAGTA CTACTTCAAA AACGTCAAGT TTGTGCCCAT AGCGGTGTGG
AGACAGACGC TGTCTACGTC GCGCGAGTTG GGAAAGGCAA TTGCCAAAGC CCTGAGAGAG
TACAAGAGGC GAGTGTACTT ATTGGCGAGT AGCGACTTCA ACCACTACGA GCCCCACGAC
GTCACCGTTA AAAAAGACGA CATGGCGATA GGCAAAATCT TGGAGTTAGA CGAGGCTGGG
CTCTTCGATG TGGCGTCTAG ATTCGACATA TCGATATGTG GAATAGGGCC CATAGCGTCG
GTGATAGTTG CGGCGAAAGA GCTGGGGTTC TCCAACGCGG CCTTGCTCAA GCATGCGACT
TCTGGCGACA CGAGCGGCTA TCGCGATGAG ACGGTTGGCT ACGCCTCAAT CCTCTTCTAT
AAATAA
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| Protein sequence | MRIRKPAVAG YFYESRADEL QARIEWSIKH EIGPKAPVLP KLGTEALGGV VPHAGYMYSG
PVAAWLYSAL AGYGAPTTFV IIGPNHYGIG APVAIMKSGA WETPFGRVEI DEELASLIAS
NYREIEDDAH AFSKEHSIEV QLPFIQYYFK NVKFVPIAVW RQTLSTSREL GKAIAKALRE
YKRRVYLLAS SDFNHYEPHD VTVKKDDMAI GKILELDEAG LFDVASRFDI SICGIGPIAS
VIVAAKELGF SNAALLKHAT SGDTSGYRDE TVGYASILFY K
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