Gene Pcal_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0025 
Symbol 
ID4909976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp18142 
End bp19248 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content54% 
IMG OID640123778 
Productprotein kinase 
Protein accessionYP_001054931 
Protein GI126458653 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTCTG CCTACAGTTT TAAGCCGCCT CGCCTTAAGT ATGCCCAAGT TCTAGCTTTC 
CCTGCCTCTG CCCTCTCTTC TCTTCTTACA TTGCCAGAGT CTGTCGTTTT AGGAATACTG
GTAGCCCTAT TGGACACGCC TCCGTATGTC GCCGCGGCGC TGGCGGCGGC TAATGCCGCA
TATCTATACG TCGTGGGGGA CACCGCGCTC TTTCTCCCAC CGTTGCTGTT CACAGTGGCA
TATGTTATAG CGTACAAGAG GGTGTTGTTT ATAGCGGAGA AGCCGCCGGC GGGCTGGCTC
TACTCGTGGC TTGGGGGTAG GTACAAGGTG GTTAAACTGC TCGGCGTGGG CGGGTTCAGC
TACGTGCTCG CGGTTAAACG CGGTGGCAAA ATCTATGCAG CTAAGATACT TCGCTATACG
GACGACTACG GAGTTCCCCT GGCCGGAGAC GAGAAGGTGC TCGCCTTCTT TGGCCAAGAG
ATGAATAGGT ATCTTGAGAT AAAGTCGGAG AGAATAGTCA AGGCGTATGA GGTGTATCTG
CCAGCGGTTG GGTACAAAGA CTTGCGCCAC TACATGAGAG ACCCGCCCTA CATCTTGCTT
GAGTACATGA GGGGAACCTT GAGAGACGTG CTTAGGATTA AGAAAACTCT GCCAGTGCCG
CAGGTGGTGG AGATGTTTAA ACAGCTCGCC GCCGGCCTAT ACGACATACA TAGGCACAAC
GTCGTCCACT TAGACATAAA GCCGGAGAAC ATCATGTTTG GAGAGGGCGG AGTAGTCAAA
ATAGGCGACA TGGGGATAGC GAAGGTTGTG GCCGGGGGGT ATGTGCATAG TAGCTATATG
TCTCCTGCAT ACGCGGCTCC GGAGCTTAAG AGAGGCGTGG CCTCCTTTGC CTCAGACGTA
TACTCGCTTG CTTGCGTCAT CTACGAGGCT TTAACGGGGA TAAACCCAAA CGTCTTCGTG
GAAAACGGAT ACCCGGTGCC TCCGCCCAGC TCTTACAACA AAGAGGTGCC CCCTTGGCTG
GACGAGCTGT TGTTAAAGAT GCTGGCGCCG GACCCAGCCC GGAGACCTAG CGCAGCTGAG
GTTCTGAAAG CGTTGGAGGG GCGCTGA
 
Protein sequence
MLSAYSFKPP RLKYAQVLAF PASALSSLLT LPESVVLGIL VALLDTPPYV AAALAAANAA 
YLYVVGDTAL FLPPLLFTVA YVIAYKRVLF IAEKPPAGWL YSWLGGRYKV VKLLGVGGFS
YVLAVKRGGK IYAAKILRYT DDYGVPLAGD EKVLAFFGQE MNRYLEIKSE RIVKAYEVYL
PAVGYKDLRH YMRDPPYILL EYMRGTLRDV LRIKKTLPVP QVVEMFKQLA AGLYDIHRHN
VVHLDIKPEN IMFGEGGVVK IGDMGIAKVV AGGYVHSSYM SPAYAAPELK RGVASFASDV
YSLACVIYEA LTGINPNVFV ENGYPVPPPS SYNKEVPPWL DELLLKMLAP DPARRPSAAE
VLKALEGR