| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0020 |
|---|
| Symbol | |
|---|
| ID | 4909273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 13546 |
|---|
| End bp | 14235 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640123773 |
|---|
| Product | peptidylprolyl isomerase, FKBP-type |
|---|
| Protein accession | YP_001054926 |
|---|
| Protein GI | 126458648 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTGT CCAAGGGCGA CTACATACTT CTGGACTACA CGGTGGTGTC TAAAGATGAC
AACAAAGTAG TTGAGACGAC GGTGGAGGCC GTGGCCAAGG AGGCCGGCAT CTACAGGCCC
GAGAACGTGT ACGGACCCCG CCTCATCGTC CTGGGCGAGA CGCAACTTTG GGAGCCGGTG
GAGAACGCCT TGCTGTCCAT AGACGAGGGG CAAGACTTCG AGGTAGAGGT GCCGCCTGAG
AAGGCCTATG GAGTAAGAGA CCCGAACAAG GTCAAGGTTG TCTCTATTAG GGAATTCCAC
CGCCACGGCA TTGTTCCACA GGTAGACGAT GTTGTGGAGT ACGAGGGGCA ACGGGCGCGG
GTGGTGTCGA TCTCGGGAGG ACGCGTGGTG TTAGACTTCA ACCACCCGCT GGCCGGCAAG
GCGTTTATTG TCAGAGGACG TGTAGTAAAG AAGCTAACTA CAGTGGAAGA GAAGGCGTTG
GCTCTGTTAA AGCTGTATTT GCCTAGGATT TCTGAGGAGA AGGTCAAGGT GGCTGTTGAA
GGCGATGTAA TAACACTGCA ACTGCCAGCC GAGGTATTGC TCTACGAGCG GATTGGTGGT
ATTCTTCTCC AGTACGTCTC AGAAGTTTCT ACTCGTTTTC CAGAGGTGAG GCGTGTTAGG
TTTATAGAGG AGGTTGAAGT AAGGAGTTAA
|
|---|
| Protein sequence | MPLSKGDYIL LDYTVVSKDD NKVVETTVEA VAKEAGIYRP ENVYGPRLIV LGETQLWEPV
ENALLSIDEG QDFEVEVPPE KAYGVRDPNK VKVVSIREFH RHGIVPQVDD VVEYEGQRAR
VVSISGGRVV LDFNHPLAGK AFIVRGRVVK KLTTVEEKAL ALLKLYLPRI SEEKVKVAVE
GDVITLQLPA EVLLYERIGG ILLQYVSEVS TRFPEVRRVR FIEEVEVRS
|
|---|
| |