Gene Pcal_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0001 
Symbol 
ID4908417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp
End bp308 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content38% 
IMG OID640123754 
Producthypothetical protein 
Protein accessionYP_001054907 
Protein GI126458629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGTCG CACATGTCCT CGTTATAACT GTGCCAAAGA AGGAGCGGAT TGTTGCTAGA 
GACTTATGCG ACTGCCTTTA CTACTACGAC CAAGCGGTTG AGTGCCGTGT TCTCTCTCCA
AGCAGGGTGT ATATTCGAAC AAGCATTGAT TATTTGCATG AATGTTTAAA ATTAAAATAC
TTTGAGAAAT TAATTAAAAA TATAGAAATA TTTGATTTTG TAAGTACTAG TAAGCCTAGT
TGTACTGAGT GTCGCGTAAT TCAGATAGGA GATCTCTACT TTGTCAAAAG TAGAGTTTAG
 
Protein sequence
MGVAHVLVIT VPKKERIVAR DLCDCLYYYD QAVECRVLSP SRVYIRTSID YLHECLKLKY 
FEKLIKNIEI FDFVSTSKPS CTECRVIQIG DLYFVKSRV