| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86981 |
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| Symbol | POL1 |
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| ID | 4851760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2760239 |
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| End bp | 2764787 |
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| Gene Length | 4549 bp |
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| Protein Length | 1463 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640393468 |
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| Product | DNA-directed DNA polymerase alpha Required for mitotic DNA synthesis, premeiotic DNA synthesis, recombination, and full sporulation |
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| Protein accession | XP_001386860 |
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| Protein GI | 126275520 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | [TIGR00592] DNA polymerase (pol2) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TAGTCTTCAG CTTTGATATT CACCTCCAAT TTCATATTCG TACATTTTTG ATATTCATTT
TCCACTTCTA TATCTGACAT GCTGTTGCGA GCCAGTAAAA GAGAGAAGTT GAAGCAGCTT
CGTGAAGCCA GAAAAACTGG TGCAAGTGTT GCTGATTTTG CCGTATCAGA AGAAGAAGAT
CTCGATGTCG GAATCTACGA TGAAGTCGAC GAGGAAACAT ATCGAGAACA CAAGAGAAAA
CAGTTGATGA ACGATGACTT TATTGTGGAC GATAATGGAG AAGGTTACGT AGACAATGGG
GTAGATGAAT GGGACGATTC TACTAGGCCA AACTACTATT CAGATGAAGA AGAGGCACAA
GCTGGGACTA AGAGAAAAAA GAAAAGTCAA AGACCTGTCA AGGTCACCAA GGTAGCCCAG
ATAAGCAACT ATTTCAAGCC TGCTGGCGGT GCTGCTCCCG TACAGTCCAA GAAGGTTGAC
GCCAACATCG ATGACATTCT TGACGACTTT GCTGATTCCG TTCCTACAAA GAAGAAGGCC
AAGAGGGAAG TCACCAATAT CTTCAAGAAC AACTCAAGCA ATAATAAGGT CATGAAAACG
AAGAAGAAAA CCTTCAATTT CTCGACTTCT GTCAAATCTG AAAAATCAGT CAAACATGTT
TCCATAGACG TTGAAGATGA CAACGACTCT CAAGACTTCT CTATGGATAT GGACACGGAG
GAGCAACCTT CTTCTCCTAT TAAGAAGGTG AAGGATGAGG TTATTGCAGA AGAGAAGGAG
AATATCGATC CTTCTACGAA GGCTTTAAAC GTTGCAGAAA ACGAGCTGGT AGAAGAGTCT
GACGATTCTG AAGATGAAAT CGTTGTTTCT AGACGACCAC GTGCTGTTGC TGCTAACAAG
AACAACAGAG CAACTTTTTC TTCTGTAAAA GCTGTAGATA TCCCTTCATC TTCTCCCACT
AGAGCCACGT CTTATTCGCA GATCAACTAT ACTGAAAAGT TGGACGAAGC ACTAATTGTC
GGCTCTAACG ATGACAAGGA CTCGTTCAAG ATGTTTTGGC TAGACTACTG TGAAGTTGAT
TCATCCTTGC TTCTTTTCGG TAAGATCTTG ACTCGTGAAG GTAATCTAGT GTCAGGTGTC
GTCAAAATCA ATGGACTTTG TAGAGAGTTA TACTTCTTGC CCAGAAAGTT TCGTTTGGTA
GACGATGAAG AGGACGTACA GCAGCCTGTA ACAGCTCTTG ATGTCAACGA CGAAGTTACA
CCATTGTTGT TACATCAATT TGGCTTGGAT GGGCTCAGGG CAAAACCAGA AAAGATGAAG
TATGCCTTTG AGCTTGCCGG AATTCCTAAG GAGACCGAGT ATTTGAAGAT TTTGTTGCCT
TTCAAGACCA ATAAGAACAA GAATATAGTG ATGCCATCTG AGCTTGAAGG TGAAACCTTC
AGCCATGTGT TTGGAACAAA TGCAAGTATC TTCGAAGCAT TTGTTCTACA GAGAAACATC
ATGGGCCCAT GTTGGATTGA AGTTTCCAAT GGTGACTTCA ATTCTATTCA AAACACATCC
CACTGTCAGG TAGAGGTATC CATTGATTCT CCGTCTTATA TCAAGCCAAT TTCTGAAGCT
CCAAAGGCTC CCAACTTGAC AGTGACGTCC ATTGCTGTTC AAACTGTCAT GAATCCAAAG
CAAAACAAGC AAGAAGTAGT AGCCGTATCT CTTGCTACTT TTCGTGATGT TCCACAGGAT
GCTCCTATCG ATGAAAATCT CCAACCGAGT GAAATGCTTA CTATAGTGAG ACCAGTAAAT
TCTGCTACAG TTCCTCCGGG ATTACAGCAA TTGGCAGAAA AACAGGGTTT GGAATTGAGA
ATATGCCCTA ATGAAAAGGT GTTATTGAAT CTTCTTTGTG CCAGTATCAA GAGACTGGAC
CCAGATGTAT TCATAGGTCA CAGACTAGAA AACATCTCAT TGGATGTTTT AGTGCAAAGA
ATGTATGACT TCAAGATATC CACCTATTCT GCACTTGGTC GTCGTAATAG AAAGCTGTTC
CCAGAAAGAT TTGGACGTAA CAACAAGGGC TTCGGAAACA ACTTGCTTAT CCGTGAGATT
TTCCAGGGAA GGTTGTTATG TGATATTGCC AACGAAATGG GTCAGTCGTT AACTTCTAAG
TGTCAGTCTT GGGAATTGCC TGAAATGTAC GACGTAGTCT GCAAGAAGAA ACACCTTCCC
ATCGAAATCA ACTATCAGAG TCCTCAGTTT GTGGAGAACG CAGATGTTAT GTTGATGGCA
CTTAAGGATA ATGCTAGCAA TGTCCAGATC ACAGCCGAGA TTGCCTTTTC CATTCAAATT
CTCTCTTTGT CTAAGCAATT GACTAACATT GCTGGTAACG CTTGGTCTCA CACTCTAAGT
GGTACCAGAG CTGGTAGAAA TGAATTCATT TTATTACATG AGTTCAAGAG AAATAATTAT
ATTGTTCCAG ACAAGGAAGA CAAATTCCAC AAGAACGCCA ATCACCAACA AGAAGCGAAG
ATGGAAGCTA CAGAGGATGA CGCTACTACT GTAACGTCCA ACAAGAAGCC AAAGTATCAG
GGTGGTCTTG TGTTTGAGCC GGAGAAGGGC TTGCACAAGA ACTACATTCT TGTTATGGAT
TTCAACTCGT TGTATCCCAG TATTATCCAA GAATTCAACA TCTGTTTCAC TACAGTTGAC
AGAGATAACT TCAACGTTAC TCATGATGAA GATAGAGATA TGCCTTCACT TCCTGAAAGG
GATTCTGCTG CTGGTGTCTT ACCCAGATTG TTGAACAGCT TGGTGTCCCG TCGTAGAGAA
GTCAAGAAGT TGCTTAAGGA TCCCAAGAAT ACACCCTTCC AAAGAGCCCA GTACGATATC
AGACAGCAGG CTTTGAAGTT GACAGCCAAC TCTATGTATG GTTGCTTGGG TTACATCAAT
TCTAGATTCT ATGCTAAGCC ATTGGCTATG TTGGTGACAA ACAAGGGTAG AGAAATCTTG
ATGGATACCA GACAATTGGC AGAATCCATT GGTTTAAGAG TTGTTTATGG TGATACAGAC
TCGGTTATGA TTGATACTGG TGTCGATGAT TTCCAAGAAG CTATCAAAAT AGGTGAGCAA
TTCAAGCTAC AGGTTAATGA AAGATACAGA TTGTTGGAAA TAGATATCGA TAACGTATTC
AAGCGTTTGT TGTTGCATGC TAAGAAAAAG TACGCCGCCA TGAATGCCTC CATCAACTCC
AAGACTGGTG AAATCAGCAC AACTTTGGAA GTAAAGGGAT TGGATATGAG ACGTCGTGAA
TACTGTCAGC TCTCGAAAGA AATATCAGCA TTTGTATTGA TGAAGATCTT GTCGGATTTG
GATCCTGAAA AGGCTTTAGG TGATGTTTAT GACTATTTGG AGGAAATGTC AGGTAAGATT
AAGAATAATG AAATTGCCGT TGACAAGTAT AAGATCAACA CCAAGTTATC CAAGGACCCG
AATAACTACC CCAACGGTAA ATCTATGCCT CAGGTTCAAG TAGCATTAAA ATTACGTTCC
GATGGTAAGG TCATCAAAGC TGGTAGTGTT ATTACTTATG TGATCACTGC TCCGAAGTCT
GATGACGACA AGTCGCTGCC CCCAGAGAGG GCCAGAGCTA TCCATGAGCT CTTGGGAAAG
AAGACAGACT TGAAGCCAGA CGCCAACTAC TACTTGGAAA AACAAATTTT TGCTCCCGTA
GAAAGATTGT TGGAAAGAAT AGAAGGCATT GATATGGTGA GAGTGGCTAA GTGCTTGGAT
ATCGACACCA AGAAGTTCAT CTTGAGAGTT AAGAATAGCG AAAATACTGG CGAAATCACA
TCGTTGGAAG CAAGTGTTAC GGACTCCGAA AGATTCAGAC AAGCCAGTTT CCTTGTATTG
AATTGTAAGT GTGGCAAACA ATTCCGCTTT GGAGGTATAA TTGCTTCCCG TGATTATTCT
GTTACCTTCA ATGGTGTGAC GTGTAATTCT TGCAGCTACA ACTTCCCTGT TCTCAAGCTC
ACTGCACAAT TGGAGGGTGC CATTCGTAAA CACATCTCGG TGTACTACTC GGGTTGGTTA
GTCTGTGACG ACAACGCTTG TGGAATCACT ACCAGACAAA TCTCGGTGTA CGGTAAGCGT
TGCATAGGTT CGTCTGGATT GGCTCATGGC TGTAAGGGTA TCATGAGATA CAAATACAGT
GATAAGGCCT TGTACAACCA ATTGTTGTAT TTCAATGCAA TTTTCGATGT CGACAAGGCA
AAGAAAGACG AATTGAGACC GATCTATGAT GCATTTACTC AGAGTGCACA AGCTGCACCA
ACTAAGCTTG CTTCGGGACA AGTTGCTGCT CTTGCTGAAC AGAACAGAGA ATTATTTGGA
TATTGCCAGG ATGTTGTGCA GAAGTATTTG CAGGACTGTG GGCGTCGGTA TGTGAACATG
GGGTCGATTT TTGACTTCAT GGGCGTATAA TGTATAATAG AATAAAATGA ACAAAATCTA
ATGAAGGTAT AATAGTAATT TAGTTAATGT AATATACTAC ATATACATC
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| Protein sequence | MLLRASKREK LKQLREARKT GASVADFAVS EEEDLDVGIY DEVDEETYRE HKRKQLMNDD
FIVDDNGEGY VDNGVDEWDD STRPNYYSDE EEAQAGTKRK KKSQRPVKVT KVAQISNYFK
PAGGAAPVQS KKVDANIDDI LDDFADSVPT KKKAKREVTN IFKNNSSNNK VMKTKKKTFN
FSTSVKSEKS VKHVSIDVED DNDSQDFSMD MDTEEQPSSP IKKVKDEVIA EEKENIDPST
KALNVAENEL VEESDDSEDE IVVSRRPRAV AANKNNRATF SSVKAVDIPS SSPTRATSYS
QINYTEKLDE ALIVGSNDDK DSFKMFWLDY CEVDSSLLLF GKILTREGNL VSGVVKINGL
CRELYFLPRK FRLVDDEEDV QQPVTALDVN DEVTPLLLHQ FGLDGLRAKP EKMKYAFELA
GIPKETEYLK ILLPFKTNKN KNIVMPSELE GETFSHVFGT NASIFEAFVL QRNIMGPCWI
EVSNGDFNSI QNTSHCQVEV SIDSPSYIKP ISEAPKAPNL TVTSIAVQTV MNPKQNKQEV
VAVSLATFRD VPQDAPIDEN LQPSEMLTIV RPVNSATVPP GLQQLAEKQG LELRICPNEK
VLLNLLCASI KRLDPDVFIG HRLENISLDV LVQRMYDFKI STYSALGRRN RKLFPERFGR
NNKGFGNNLL IREIFQGRLL CDIANEMGQS LTSKCQSWEL PEMYDVVCKK KHLPIEINYQ
SPQFVENADV MLMALKDNAS NVQITAEIAF SIQILSLSKQ LTNIAGNAWS HTLSGTRAGR
NEFILLHEFK RNNYIVPDKE DKFHKNANHQ QEAKMEATED DATTVTSNKK PKYQGGLVFE
PEKGLHKNYI LVMDFNSLYP SIIQEFNICF TTVDRDNFNV THDEDRDMPS LPERDSAAGV
LPRLLNSLVS RRREVKKLLK DPKNTPFQRA QYDIRQQALK LTANSMYGCL GYINSRFYAK
PLAMLVTNKG REILMDTRQL AESIGLRVVY GDTDSVMIDT GVDDFQEAIK IGEQFKLQVN
ERYRLLEIDI DNVFKRLLLH AKKKYAAMNA SINSKTGEIS TTLEVKGLDM RRREYCQLSK
EISAFVLMKI LSDLDPEKAL GDVYDYLEEM SGKIKNNEIA VDKYKINTKL SKDPNNYPNG
KSMPQVQVAL KLRSDGKVIK AGSVITYVIT APKSDDDKSL PPERARAIHE LLGKKTDLKP
DANYYLEKQI FAPVERLLER IEGIDMVRVA KCLDIDTKKF ILRVKNSENT GEITSLEASV
TDSERFRQAS FLVLNCKCGK QFRFGGIIAS RDYSVTFNGV TCNSCSYNFP VLKLTAQLEG
AIRKHISVYY SGWLVCDDNA CGITTRQISV YGKRCIGSSG LAHGCKGIMR YKYSDKALYN
QLLYFNAIFD VDKAKKDELR PIYDAFTQSA QAAPTKLASG QVAALAEQNR ELFGYCQDVV
QKYLQDCGRR YVNMGSIFDF MGV
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