| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86849 |
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| Symbol | DIS3 |
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| ID | 4851890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3115055 |
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| End bp | 3118130 |
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| Gene Length | 3076 bp |
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| Protein Length | 989 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393598 |
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| Product | 3'-5' exoribonuclease required for 3 end formation of 5.8S rRNA |
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| Protein accession | XP_001387162 |
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| Protein GI | 126275931 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.188778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CTTACGTTTC CATAATTTCT CAAGATGATT GGGAACAGAA AACGATTGTC TAGTGGACTT
AGTGTCACCT CCAAGGTGTT CGTGAGGTCT CGTAATGGTG GAGCCCAAAA GATTGTTAGG
GAACACTACT TAAGAGACGA TATACCATGC TACTCCAAGG CATGTAAAGT TTGTCACGAC
ATCATCAAGA CGGATGCAGC AGGTGAGCTC CCTCGTTTCA TCTTGTCCGA GAACCCAAGC
AAGACTAAAT CTGGTTTGCG CCATTACATA GTAGTAGACA CCAATATCAT TCTTCATGCC
ATCGATTTGT TGGAGAACGT CAGTTGTTTC TACGACGTAA TTGTGCCTCA GACAGTTTTG
GAAGAAGTGA AAAATAGATC CTTCCCTATC TACCAGCGAC TTCGGGGTTT GGTGAAATCA
GAAGATAAGC GTTTTATCGT ATTTCACAAC GAGTACGCTG AAGCTACTTA CATCACGAGA
AACAAGAACG AGTCCATAAA CGATAGAAAC GACAGAGCCA TCCGGAAGGT GGCTTCGTGG
TTCGGTACTC ACATGAAGAC CAACCATTCT GAAAACGATA TAGGAATCAT TTTTATCTGT
AATGACGCTG ATAACCGTCA AAAGGCTCGT GCTGAGAAGA TAGATGCCCG ATCCCTTGTA
GAGTACTTCG ATGATTTACC TAATGGTGAA GACTTAAGGG ACTTGATTCC AAGTGATATC
AACAGTGGAG TAGACTTCCA TAACGAGAAT GAGGCGTCAT TTCCGGAGTA CTACTCGAAC
TCGAGAATCA TGGCTGGTGT CAAGAATGGT ACTCTTTATC AGGGTATGTT GAATATCTCT
TCGTACAACT TTCTTCAAGG TACAGTGCAA GTTCCAGCTT TCAGGAAGCC ACTTTTGATT
GTCGGCTCCC AGAACCTCAA CCGTGCCTTC AACTCGGATT CAGTTATAGT AGAGTTGTTA
CCCAAAGATA AATGGAGAGA ACCTTCTACC ACGATAGTGG AAGAAAGTAA CATTGGTTCT
AACGACAACG CCAACGATGA AGATGAAGAA GATGTCGGTT CTGCAGGCTC CGGTGTAGTT
TCCGATAAAG AAAGAATTTT GTTGGCCCAG GAAGCATTGA AGGCTACTTC TTCTTCAGCA
GGAGTGCAAA AGAGACTTCA GCCTACTGCT AGAGTTGTAG GTATTATGAG AAGATCATGG
AGATACTACG TAGGGCAAAT CGCACCATCT TCTGTTTCTA GCGACGATAC TGGTAATGCT
TCCAAGAGCT GTTTTGTCAT CTTGATGGAC AAGGTATTGC CTAAGATCAG GATCAGAACA
AGAAAAGCCA AGGAGTTCTT AGGTCAGAGA ATCGTTGTTG TTGTGGACTC ATGGCCAGCA
GATTCTCGTT ATCCAAATGG ACATTTTGTG AGAACTCTTG GTGAAATAGA AAGTGCCGAG
GCTGAAACTG AGGCATTGTT GTTGGAACAT GATGTAGAGT ACAGACCCTT CTCCAAGAAT
GTCTTGGACT GTTTGCCGGA AGAAGGTGAC AATTGGGTTG TTCCAGATCT TGTCAACACA
GACGATCCCA AGCTCAAGAA GAGGGTTGAC TTGAGAGACA AGTTGGTATG TTCTATCGAT
CCACCCAACT GTGTGGATAT CGATGATGCC TTACATGCAA AACCACTCCC CAACGGCAAC
TACGAAGTTG GTGTTCATAT AGCTGATGTG ACCCATTTCG TTAAGCCTAA CACAGCATTA
GATCAAGAAG GTGCCTCTAG GGGTACATCT GTCTACTTGG TGGATAAAAG AATCGACATG
TTGCCCATGT TGTTGGGTAC TAATTTGTGT TCGTTGAAGC CATATGTGGA CAGGTTTGCC
TTTTCAGTTA TTTGGGAATT GGATGACAAT GCTAACATTG TCAAGGTTGA GTACATGAAG
TCAGTGATCA AGTCCAGAGA AGCCTTTTCT TACGAAAGAG CCCAAACCCG GATCGACGAT
AAGTCACAAA CTGACGAGTT GACTGAATCG ATGAGAATCT TGTTGAAGCT TTCCAAAAAG
CTCAAACAGC AGAGATTGGA TGCCGGTGCC TTAAACTTAG CATCGCCGGA AGTCAAGGTC
CACATGGATA GTGAGACGTC AGATCCCAAT GAGGTTGAAA TCAAGAAGTT ATTGGAGACC
AACTCTCTTG TTGAAGAGTT CATGTTGTTG GCCAACATTT CCGTAGCCAG AAAGATTTAC
GATTCATATC CACAAACTGC GATGTTAAGA AGACACGCAC CTCCTCCAGC AACAAATTTC
GAGCAGTTGA ACGATATGTT GAGTGTGAGA AAGCCAGGCT TGTCTATTTC TTTGGAGAGT
TCCAGAGCTT TGGCGGACTC GTTGGATAGA TGTGAAGATC CACAAGATCC ATATTTCAAC
ACCCTTTTGC GTATCATGTC AACTAGATGT ATGATGGCAG CTGAGTACTT CTCATCTGGG
TCGTACGGAT ATCCTGAATT CAGACACTAT GGTTTGGCTG TAGATATCTA CACACATTTT
ACGTCACCTA TCAGAAGATA CTGTGATGTT GTAGCACACA GACAGTTGGC TGGTGCAATT
GGTTATGAAA ACTTGGACTT GAGTCACAGA GACAAAAACA AAATGGAGAC AATTGTCAAG
AATATCAATA GAAGACACAG AAGTGCACAA TTTGCTGGCC GTGCCAGTAT TGAGTACTAT
GTTGGACAAG TTATGAAAAA TAATGAAGCC GAACATGAAG GGTATGTGAT CAAGTGTTTC
AACAACGGAA TTGTTGTTCT TGTGCCCAAG TTTGGCATTG AAGGTTTGAT AAAGCTTGAG
ATGTTAGGTG ATGTGAACAC TGCTATCTAT GATGAAGACA AGTACGAGTT GAAGTTCACT
GATCTCCAAG GTAAGGAAAG AAGAGTTGCA GTTTTTGACA AAGTTAATGT AGATGTGAAG
TCAGTTAAAG ATGAAGTCAG TGGTAACAGA AAGGCGCAAT TACTTTTGCG TTGAAGTTGT
ACTATAGAGT ATCTAGGATA TGCATAGTAT CTTGGGTATA CATAAAAATA TATACACATT
AGAAAGATTA TCTATT
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| Protein sequence | MIGNRKRLSS GLSVTSKVFV RSRNGGAQKI VREHYLRDDI PCYSKACKVC HDIIKTDAAG
ELPRFILSEN PSKTKSGLRH YIVVDTNIIL HAIDLLENVS CFYDVIVPQT VLEEVKNRSF
PIYQRLRGLV KSEDKRFIVF HNEYAEATYI TRNKNESIND RNDRAIRKVA SWFGTHMKTN
HSENDIGIIF ICNDADNRQK ARAEKIDARS LVEYFDDLPN GEDLRDLIPS DINSGVDFHN
ENEASFPEYY SNSRIMAGVK NGTLYQGMLN ISSYNFLQGT VQVPAFRKPL LIVGSQNLNR
AFNSDSVIVE LLPKDKWREP STTIVEESNI GSNDNANDED EEDVGSAGSG VVSDKERILL
AQEALKATSS SAGVQKRLQP TARVVGIMRR SWRYYVGQIA PSSVSSDDTG NASKSCFVIL
MDKVLPKIRI RTRKAKEFLG QRIVVVVDSW PADSRYPNGH FVRTLGEIES AEAETEALLL
EHDVEYRPFS KNVLDCLPEE GDNWVVPDLV NTDDPKLKKR VDLRDKLVCS IDPPNCVDID
DALHAKPLPN GNYEVGVHIA DVTHFVKPNT ALDQEGASRG TSVYLVDKRI DMLPMLLGTN
LCSLKPYVDR FAFSVIWELD DNANIVKVEY MKSVIKSREA FSYERAQTRI DDKSQTDELT
ESMRILLKLS KKLKQQRLDA GALNLASPEV KVHMDSETSD PNEVEIKKLL ETNSLVEEFM
LLANISVARK IYDSYPQTAM LRRHAPPPAT NFEQLNDMLS VRKPGLSISL ESSRALADSL
DRCEDPQDPY FNTLLRIMST RCMMAAEYFS SGSYGYPEFR HYGLAVDIYT HFTSPIRRYC
DVVAHRQLAG AIGYENLDLS HRDKNKMETI VKNINRRHRS AQFAGRASIE YYVGQVMKNN
EAEHEGYVIK CFNNGIVVLV PKFGIEGLIK LEMLGDVNTA IYDEDKYELK FTDLQGKERR
VAVFDKVNVD VKSVKDEVSG NRKAQLLLR
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