| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86443 |
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| Symbol | PDC2 |
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| ID | 4850870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 285510 |
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| End bp | 287347 |
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| Gene Length | 1838 bp |
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| Protein Length | 570 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640392578 |
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| Product | pyruvate decarboxylase |
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| Protein accession | XP_001387705 |
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| Protein GI | 126273795 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTTAGAATAT CTACACCTAT TTTTAACTGT AGATCCCAAT AATATACTGT CCTTATAGCA
ATGGTATCAA CCTACCCAGA ATCAGAGGTT ACTCTAGGAA GGTACCTCTT TGAGCGACTC
CACCAATTGA AAGTGGACAC CATTTTCGGC TTGCCGGGTG ACTTCAACCT TTCCTTATTG
GACAAAGTGT ATGAAGTTCC GGATATGAGG TGGGCTGGAA ATGCCAACGA ATTGAATGCT
GCCTATGCTG CCGATGGTTA CTCCAGAATA AAGGGATTGT CTTGCTTGGT CACAACTTTT
GGTGTTGGTG AATTGTCTGC TTTAAACGGA GTTGGTGGTG CCTATGCTGA ACACGTAGGA
CTTCTACATG TCGTTGGAGT TCCATCCATA TCGTCACAGG CTAAACAGTT GTTGCTCCAC
CATACCTTGG GTAATGGTGA CTTCACTGTT TTTCACAGAA TGTCCAATAG CATTTCTCAA
ACTACAGCAT TTCTCTCAGA TATCTCTATT GCACCAGGTC AAATAGATAG ATGCATCAGA
GAAGCATATG TTCATCAGAG ACCAGTTTAT GTTGGTTTAC CGGCAAATAT GGTTGATCTC
AAGGTTCCTT CTAGTCTCTT AGAAACTCCA ATTGATTTGA AATTGAAACA AAATGATCCT
GAAGCTCAGG AAGAAGTTGT TGAAACAGTC CTGAAGTTGG TGTCCCAAGC TACAAACCCC
ATTATCTTGG TAGACGCTTG TGCCCTCAGA CACAATTGCA AAGAGGAAGT CAAACAATTG
GTTGATGCCA CTAATTTTCA AGTCTTTACA ACTCCAATGG GTAAATCTGG TATCTCCGAA
TCTCATCCAA GATTTGGCGG TGTCTATGTC GGGACAATGT CGAGTCCTCA AGTCAAAAAA
GCCGTTGAAA ATGCCGATCT TATACTATCT GTTGGTTCGT TGTTATCGGA CTTCAATACA
GGTTCATTTT CATACTCCTA CAAGACGAAG AATGTTGTTG AATTCCACTC TGACTATATG
AAAATCAGAC AGGCCACCTT CCCAGGAGTT CAAATGAAAG AAGCCTTGCA ACAGTTGATA
AAAAGGGTCT CTTCTTACAT CAATCCAAGC TACATTCCTA CTCGAGTTCC TAAAAGGAAA
CAGCCATTGA AAGCTCCATC AGAAGCTCCT TTGACCCAAG AATATTTGTG GTCTAAAGTA
TCCGGCTGGT TTAGAGAGGG TGATATTATC GTAACCGAAA CTGGTACATC TGCTTTCGGA
ATTATTCAAT CCCATTTTCC CAGCAACACT ATCGGTATAT CCCAAGTCTT GTGGGGCTCA
ATTGGTTTCA CAGTAGGTGC AACAGTTGGT GCTGCCATGG CAGCCCAGGA AATCGACCCT
AGCAGGAGAG TAATTTTGTT CGTCGGTGAT GGTTCATTGC AGTTGACGGT TCAGGAAATC
TCTACGTTGT GTAAATGGGA TTGTAACAAT ACTTATCTTT ACGTGTTGAA CAATGATGGT
TACACTATAG AAAGGTTGAT CCACGGCAAA AGTGCCAGCT ACAACGATAT ACAGCCTTGG
AACCATTTAT CCTTGCTTCG CTTATTCAAT GCTAAGAAAT ACCAAAATGT CAGAGTATCG
ACTGCTGGAG AATTGGACTC TTTGTTCTCT GATAAGAAAT TTGCTTCTCC AGATAGGATA
AGAATGATTG AGGTGATGTT ATCGAGATTG GATGCACCAG CAAATCTTGT TGCTCAAGCA
AAGTTGTCTG AACGGGTAAA CCTTGAAAAT TGAATTAAAC ATACCAATTC ACCGCTATTT
AGTTATTATA TTCATAGCAG CAGTTATAGA ATTGGCTT
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| Protein sequence | MVSTYPESEV TLGRYLFERL HQLKVDTIFG LPGDFNLSLL DKVYEVPDMR WAGNANELNA
AYAADGYSRI KGLSCLVTTF GVGELSALNG VGGAYAEHVG LLHVVGVPSI SSQAKQLLLH
HTLGNGDFTV FHRMSNSISQ TTAFLSDISI APGQIDRCIR EAYVHQRPVY VGLPANMVDL
KVPSSLLETP IDLKLKQNDP EAQEEVVETV LKLVSQATNP IILVDACALR HNCKEEVKQL
VDATNFQVFT TPMGKSGISE SHPRFGGVYV GTMSSPQVKK AVENADLILS VGSLLSDFNT
GSFSYSYKTK NVVEFHSDYM KIRQATFPGV QMKEALQQLI KRVSSYINPS YIPTRVPKRK
QPLKAPSEAP LTQEYLWSKV SGWFREGDII VTETGTSAFG IIQSHFPSNT IGISQVLWGS
IGFTVGATVG AAMAAQEIDP SRRVILFVGD GSLQLTVQEI STLCKWDCNN TYLYVLNNDG
YTIERLIHGK SASYNDIQPW NHLSLLRLFN AKKYQNVRVS TAGELDSLFS DKKFASPDRI
RMIEVMLSRL DAPANLVAQA KLSERVNLEN
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