| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80454 |
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| Symbol | ITR2 |
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| ID | 4851257 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1328326 |
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| End bp | 1330186 |
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| Gene Length | 1861 bp |
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| Protein Length | 522 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640392965 |
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| Product | myo-inositol transporter |
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| Protein accession | XP_001387902 |
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| Protein GI | 126274243 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.806803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.231524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAATC CTAAATTAAA AAACAACTCC AGTTCCCAGT TGTTGAACTC AGAGGTTAAC
CTCTCCACCT CTTCAGTCTC GTCCAGCTCC TCTGCCAACG CGTTGTTGAA TACAAACAAA
GTCAGACAAT ATGAATCTTA TTCAAACGGT TCTCCTGCTA TAAACAAAAC TAATACAAGT
GATTTAGACC TCGATCTCCA GTCTTATGGC GGTTCTGAAT CTGAGTCTAG ACCTTCCAGA
CTCGTCATCA TCTTGACGCT TGCCTCTTCT ATATCTGGTT TCATGTTTGG TTACGATACC
GGTTATATCT CTTCGGCGTT AGTGCAAATA GGTACTGATT TGAGTGACAA AATTCTTACC
AACGGTGAAA AAGAGTTCAT CACTTCAGCA ACATCGTTGG GTGCTTTGAT TGGTGCTGTT
ATATCGGGTA TCTTGGTCAA CTTGATTGGT CGTAAGACGG TATTGTTAGG TTCTAATGTT
GTATTTGTAA TAGGTACTAT CATCCAGTTG GCTTCGAAAA CGGTATGGAC TATGATCGCA
GGAAGATTCG TGTTGGGTCT TGGCGTTGGT ATTGCCTCTT TGATCGCTCC CTTAATGTTG
AGTGAATTGG CTCCGGCCAA GTACAGAGGT AGATTAATTG TCACTAACGT CATGTTCATC
ACAGGTGGTC AACTTGTAGC ATACTTCATC AACTGGGGCC TCACACGGGT CAGCCATGGC
TGGAGAATTT CTGTTGGCTT GTGCATGGTG CCTCCTGTAG TTCAGTTCGT ATTGTTTTGG
TTCTTGCCTG ATACTCCTAG ATACTATGTT ATCAAAGGTG ACATAGAAAC AGCTAAAGAA
GTCGTCAGAA GAACCCATAA TCATCCCTCA GAAGAATTTG TCAACGCTAC TATTGAAGAA
ATGATCGCTT CAAACTCAAC CGTGTCTGGT TCTAGCCAGT TGAGACGTGT ATGGAACTCC
ATCAAATTGA TCCATACCAA CCCTGCTAAT TTCAGAGCCT TGATCTTAGC CACTGGCTTG
CAGGGTATTC AGCAGTTCAC TGGTTTCAAC TCATTGATGT ACTTCTCTGC TACCATTTTC
GAAACCATCG GCTTCAAGAA TGCAACTGCT GTGTCTATCA TCGTTGCTGC CACCAACTTC
GTTTTCACCG CTATTGCCTT GTGTATTGTC GATAAGGTAG GTAGAAGAAG AATCTTGCTT
TGGGCGATTC CCTGTATGGC TGGCTCCTTG GTAATCTGTG CTATTGCTTT CCACTTCTTG
GGTGTAGTTT TCACTTCGGG CTCCAACGTC GAAGTCCGTA GTTCAGGAAT TTCCGGTTGG
GGTATTGTAG TCATTATTGG CATGGTCTTG TATGTCGCTT CCTACGCCAT TGGTATTGGA
AACAGTGCCT GGATCGGTGT GGAATTGTTC TCTGATGTGA ACGTCAGATC TGTCGGAGCC
ATGTATGCTG CTGCTACTAA CTGGGCTGGG TCATTGGTCA TTGCCTCTAC TTTCTTGACT
ATGTTGGAAA ACATTACCCC AACTGGTACC TTCTCATTCT TTGCTGGCTT GTGTGCTGTT
TCGTTCTTGT TTGTCTATTT ATTGTTGCCC GAAGTTGCCG GATTGGAATT GGAAGAGACA
ACTGCCTTCT TAGCCGACGG ATTCAATGTC AAACAAGCTT CCAAGTTGTC CAAAGAAAGA
AAGAAGCACT CAAAATTCAT CAACCAGCAT TCTGCTTAAG AAAGCGGACC CATCAAAAAC
AAAAGGTTGC ATCCACTTTT CAATTCTTGT ATGATTGAAT CTCAAGGAGA ATTCGGTTTC
GGTTTTGCTT GTATGTATCC AATCTTTAAT ATTTATATGC CTTTATTTAC ATTTAATCGT
T
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| Protein sequence | MSNPKLKNNS SSQLLNSEVN LSTSSSRPSR LVIILTLASS ISGFMFGYDT GYISSALVQI
GTDLSDKILT NGEKEFITSA TSLGALIGAV ISGILVNLIG RKTVLLGSNV VFVIGTIIQL
ASKTVWTMIA GRFVLGLGVG IASLIAPLML SELAPAKYRG RLIVTNVMFI TGGQLVAYFI
NWGLTRVSHG WRISVGLCMV PPVVQFVLFW FLPDTPRYYV IKGDIETAKE VVRRTHNHPS
EEFVNATIEE MIASNSTVSG SSQLRRVWNS IKLIHTNPAN FRALILATGL QGIQQFTGFN
SLMYFSATIF ETIGFKNATA VSIIVAATNF VFTAIALCIV DKVGRRRILL WAIPCMAGSL
VICAIAFHFL GVVFTSGSNV EVRSSGISGW GIVVIIGMVL YVASYAIGIG NSAWIGVELF
SDVNVRSVGA MYAAATNWAG SLVIASTFLT MLENITPTGT FSFFAGLCAV SFLFVYLLLP
EVAGLELEET TAFLADGFNV KQASKLSKER KKHSKFINQH SA
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