| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80185 |
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| Symbol | CAD2 |
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| ID | 4851458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1859869 |
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| End bp | 1861161 |
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| Gene Length | 1293 bp |
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| Protein Length | 331 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393166 |
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| Product | CAD family protein |
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| Protein accession | XP_001387596 |
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| Protein GI | 126274586 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.101414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GGTTTGGTAT CAATTGATAT TCTCTTGTCT GGCTTTTTCG AATTCTAATT GACACCATTC
TAACTTCGAT TTCGCAATTA TAATCCGGAG TCGTTTCCCT AATTGGAATT TTTCAAGTAC
TTATAATCGC TGATTTCCAG TTTTTCAGAA TCCCCATTCG GAGTATTTCG CTTTTCATTG
AACTATTCTG CTTTCTGGAT ATTCAATTAA CCTCAATTGC TACTCAATAC ATATTACGTC
ATGTCTGAAG TCTACTTAGT CACCGGAGGT ACTGGTTACG TTGCCGGATT TGTACTTCTC
CAGTTGTTGG AACAGGGTGC AAAGGTCAAA ACCTCGATCA GAAGTTTGGC CAAAGAAGCC
CAATTGAGAG AGTCTCTCTA CTCCTCAAGT GACAAGCTCA CGAAGGAAAT CGTGGATGCC
AACTTGAAGG TCTATCAAGC TGATTTAACC TCTGACGCTA ATTGGCCAGA GATCTTTGAA
GACGTCACCT ACGTACTCCA TGTAGCATCT CCATTTCCCT CTTCTCCACC AAAAGATCCT
AACGATTTGA TTATTCCTGC TAGAGAAGGT ACCTTGAGAA TCCTCGGCTA TGCTGCTGAA
ACCAACACTG TAAAGCACGT AGTCGTGACT TCGTCTTTCG CAGCCATTGG CTTTGGTCAT
GCTGAAGTCA AGCCACTCTA CACTGAAAAG GACTGGACTG AAACGGAAAA CTTGGACCGT
CCTTACACCG TCTCCAAGAC ATTGGCTGAA AAGGCTGCTT GGGAATACGT TGAAGCTAAA
CCAGTCCAAT ATGGCTTGAC TGTGATCAAC CCAGTCTTGG TTATCGGACC TTCTTTGAAG
AAGCAAGTTA CCAACTCTAC CTCCTTGAAC ATCATCCAGG GCTTGATCGA TGGCTCGAAG
AAAAATGGTG TAGATCCATC TTCTGTCCAC CTTGTTGACG TTAGAGATGT TGCTAAGTTG
CACATCTTGG CTTTGACCAC AGAAGAAGCT CTTGGTGAGA GATTCTTGGC TGCTACTGGT
AGCACCCTTA CGTGGGTAGA TGCAGCTAAC ATCTTGAGAT CTAGAATCCC AGAGAAGTAT
GTAGCTAACT TGCCTACAAA GGAAACTGGC CCTAGTGAAA CTCCTAAGTT GATTTCTGTT
GAAAAGGCCA AGAAGACCTT CAACTGGACC CCAATCTCTG ACGAAGAGTC CTTGGTTGCC
ACTGTCGAAG GCATTATCCA AGAAGGAAAG GTCTAGTAGG ACGTTTATAA CAATTTAAAT
ATGCATATAA TGAACAATGT ATGTCATATA TTT
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| Protein sequence | MSEVYLVTGG TGYVAGFVLL QLLEQGAKVK TSIRSLAKEA QLRESLYSSS DKLTKEIVDA
NLKVYQADLT SDANWPEIFE DVTYVLHVAS PFPSSPPKDP NDLIIPAREG TLRILGYAAE
TNTVKHVVVT SSFAAIGFGH AEVKPLYTEK DWTETENLDR PYTVSKTLAE KAAWEYVEAK
PVQYGLTVIN PVLVIGPSLK KQVTNSTSLN IIQGLIDGSK KNGVDPSSVH LVDVRDVAKL
HILALTTEEA LGERFLAATG STLTWVDAAN ILRSRIPEKY VANLPTKETG PSETPKLISV
EKAKKTFNWT PISDEESLVA TVEGIIQEGK V
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