| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_74722 |
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| Symbol | SCW4 |
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| ID | 4851398 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1710561 |
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| End bp | 1712124 |
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| Gene Length | 1564 bp |
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| Protein Length | 308 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640393106 |
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| Product | Glycoside hydrolase, family 17 |
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| Protein accession | XP_001387556 |
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| Protein GI | 126274490 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5309] Exo-beta-1,3-glucanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.154228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CTCGTTCGTA CAAAATGCAA ATCAAGTACT TAACAGCTGT GGCCGCTCTT TTGGCCTCTG
CCTCCGCCAT TGGTGACGTA AGTATAGCCG CCGTGTAGAT ATGATAGACA GATTGACAAA
GAGACAATGA GACAATACAA TTTGGTGCGA TTATGATACA TAACATATGA GTTTTTTGGT
ACAAGATCAG ACGTGATTAC GCTGATATTG CTGTGATGAA GCGATGGTGT ACATGTCTGT
ATTGTAAGTC GTATCAAGCG TGACTTGAGG TCAAATGTTG TGTTGCTGAT GATGTTTGCG
ATGAACAGGT GATGCGAACA ATAAACATGG ATCCCGACAA CAATTCGAGA ATAAGCCTGT
GGTGGCCACA AACTTGAATG ACATTCACGA TAGTTTGGAT ATGCTAGTCT TTATCAACAT
TCACCGCCAT CAGTAGCAAG AACACACACG TTTAGGACGA AAACAATGTC ACAGTATCAT
GCATAACAAG TCCTTATGCC ATCTTGACCT ATATCTCAAA TTGTCATATC TTCTCATTTC
TTTATTTCCT TCATTCCATA CTAACCTTCT AGCTTGGATT CAACTTAGGT GTCAAGGACA
ACGCCGGAAA CTGTAAAACC GCCGATGAGT ACGCCGCCGA CTTGAAGAAC ATCGCTGGCT
ACTCCAAGGT CGTCAAGACC TACGCCGTCT CTGACTGTAA CACCTTGCAA ATCTTGGGTC
CTGCTGCCGA AGACGCTGGT TTCCAGGTCA TGCTTGGTAT CTGGCCAACT GACAGCGCCC
ATTTCGACGC TGAAAAGCAA GCCTTGAAGG ACTACTTGCC CAGCATCTCC GCTTCGACCG
TCAAGTCCTT CCTCGTCGGT TCGGAAGCCT TGTACAGAGG AGACTTGACT CCTCAGGAAT
TGGCTTCTGC CATCTCCGAC ATCAAGGACA TTGTCGCTGA CATCAAGGAC AAGGACGGCA
ACTCGTTCTC GTCTGTTCCT GTAGGCACTG TAGACTCCTG GAACGTCTTG GTTGATTACT
ACTCTCAACC AGCCATCAAG GCCGCTGACG TTGTCTACGC CAACGCCTTC TCATACTGGC
AAGGACAAAC CAAGGCCAAC GCTTCGTACT CCTTCTTCGA CGATATCATG CAGGCCTTGC
AAGTCATCCA GACCACCAAG GGTGACACCA ACATCGAATT CTGGGTTGGT GAAACCGGCT
GGCCAACTGA AGGTACCAAC TTTGAAGACT CCATTCCATC TGTTGATAAC GCTGCTGACT
TCTGGCAAGA AGCCATCTGT GCCATGAGAG GCTGGGGTGT CAACGTTGCT GTCTTCGAAT
ACTCTGACGA AATCTGGAAG CCAGACACTT CTGGTACTTC TGATGTCGAA AAGCACTGGG
GTGTATGGGA TTCCAACGGA AAGTTGAAGT ACGACATCAA CTGTCACTTC GGTTAAACCT
AATGCTTCTA TGCCCTTTCC GTATACCCTC CTCTATCGTT TCATTTCCTC GTCAATTACT
AGTAAAGCCC TAGGGCAGAA AAATTCATAC ATATATCTAG AGTGAATAAA TAGAAAAGCT
CGAT
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| Protein sequence | MQIKYLTAVA ALLASASAIG DLGFNLGVKD NAGNCKTADE YAADLKNIAG YSKVVKTYAV
SDCNTLQILG PAAEDAGFQV MLGIWPTDSA HFDAEKQALK DYLPSISAST VKSFLVGSEA
LYRGDLTPQE LASAISDIKD IVADIKDKDG NSFSSVPVGT VDSWNVLVDY YSQPAIKAAD
VVYANAFSYW QGQTKANASY SFFDDIMQAL QVIQTTKGDT NIEFWVGETG WPTEGTNFED
SIPSVDNAAD FWQEAICAMR GWGVNVAVFE YSDEIWKPDT SGTSDVEKHW GVWDSNGKLK
YDINCHFG
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