Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_74639 |
Symbol | |
ID | 4851478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 1927650 |
End bp | 1928954 |
Gene Length | 1305 bp |
Protein Length | 363 aa |
Translation table | |
GC content | 48% |
IMG OID | 640393186 |
Product | predicted protein |
Protein accession | XP_001387609 |
Protein GI | 126274606 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.108089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTTCTCTCTT CTCTTCATCA TTATACACAC ATTACGATGT CTGCTCGTCC TCAAGTCTCC GTCGTCTCCG CCAAGGGTGA ACAAACCGCC ACTCAGTTGC CATTGCCAGC TGTCTTCTCT GCTCCAGTCA GACCAGACAT TGTCCACTCT GTCTTCGTCA GAGTGAACAA GAACAAGAGA CAAGCTTACG CTGTCTCTGA AAAGGCTGGT CACCAAACCT CTGCTGAATC CTGGGGTACT GGTAGAGCTG TTGCCAGAAT TCCAAGAGTT GGTGGTGGTG GTACCCACCG TTCCGGTCAA GCTGCCTTCG GTAACATGTG TAGAGGTGGT CGTATGTTCG CTCCTACCAA GACCTGGAGA AAATGGCACG TCAAGGTGAA CCACAACGAA AAGCGTTACG CCACTGCTTC TGCCATTGCT GCTTCTGCTG TCACTTCTTT GGTTTTGGCC AGAGGTCACA GAGTTGAACA AGTTAAGGAA TTGCCATTGG TTGTTTCCAA CGACTTCGAA TCTGTCACCA AGACCAAGGA CGCTGTCGCT GTCTTGAAGG CTGTTGGTGC CCACAAGGAT GTCATCAAGG TCATCAAGTC CAAGAAGTTG AGAGCCGGTA AGGGTAAGTT GAGAGGTAGA AGATTCACCC AAAGAAGAGG TCCATTGGTT GTCTACTCTC AAGACAACGG TATCGTCAAG GCCTTGAGAA ACGTCCCAGG TGTCGAAACC TCTGACGTCA AGCACCTCGG CTTGTTGCAA TTGGCTCCAG GTGCTCACCT CGGTAGATTC ATCATCTGGA CTCAAGGTGC TTTCGAATCC TTGGACTCTG TCTACGGTTC TGACTCCACC AAGTCCGTCA AGTCCGGTTA CTCCTTGCCA GCCAACATCA TCTCCAACAC CGACGTCACC AGATTGATCA ACTCTGCTGA AGTCCAAGCT GTTGTCAGAC CAGCTGGCCA AGCCACCCAA AAGAGAACTC ACGTCTTGAA GAAGAACCCA TTGAAGAACA AGCAAGTTTT GTTGAGATTG AACCCTTACG CCAAGGCTTA CTCTGCTGAA AAGTTGGGTT CCTCTAAGGT TGAAGCCTCC AAGGCCAAGC CATCCAAGGG TCAATTCGCC GCTGTCTTGA GAGATTAAGT GCTTTCGTGA AGAACACTAG CAGATTTAGG AGATTGTAAG ATTATCATCG TACCAATTGA CTTGATTGCT AATTTACTTT ATTGATTGCA TATACCTTAA GATACCTGAA CCGTTTATTA TAGTTTTGTA GTACAGAGGC CATTGAACGT ATGGAAAATA TATGATAAGC TTTAT
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Protein sequence | MSARPQVSVV SAKGEQTATQ LPLPAVFSAP VRPDIVHSVF VRVNKNKRQA YAVSEKAGHQ TSAESWGTGR AVARIPRVGG GGTHRSGQAA FGNMCRGGRM FAPTKTWRKW HVKVNHNEKR YATASAIAAS AVTSLVLARG HRVEQVKELP LVVSNDFESV TKTKDAVAVL KAVGAHKDVI KVIKSKKLRA GKGKLRGRRF TQRRGPLVVY SQDNGIVKAL RNVPGVETSD VKHLGLLQLA PGAHLGRFII WTQGAFESLD SVYGSDSTKS VKSGYSLPAN IISNTDVTRL INSAEVQAVV RPAGQATQKR THVLKKNPLK NKQVLLRLNP YAKAYSAEKL GSSKVEASKA KPSKGQFAAV LRD
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