| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_69792 |
|---|
| Symbol | |
|---|
| ID | 4851837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 2965046 |
|---|
| End bp | 2966076 |
|---|
| Gene Length | 1031 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | |
|---|
| GC content | 37% |
|---|
| IMG OID | 640393545 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386900 |
|---|
| Protein GI | 126275749 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2163] Ribosomal protein L14E/L6E/L27E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000150395 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | CAACCAAAGA TGTCTACCTT CTCTACCGTT AAAGCTTCCA ACTGGAGATA CGTTGAATTA
GGCCGTGTTG TTTTGGTTAA CAACAAGGAC TTGGCCACCA TCGTTGAAAT CATTGACCAA
AAGAGAGTAT GTATTTGAAA CCCATAAAGT AGAATTCAAG AACAGAAAAC GAACAGAGAG
AGACTCTCTT CAAAGCGAAC GAAACCGAAT ATAATCACCA TATCATTCCA TAAAGCCCAA
AGAGTTCAGA CCATTGTATT AATGTCATAT CCTTCATTTT CATATTTTGT CAGTACCCGT
CTCGAAATAA GTTCATAATT TTTCATTTTG GCAAATAGGC AAATTTTTCT GAACCGAGCC
TATCCCAGCC TTTTGCTTTC GTTCACAACG CTATCCAGTA GTCACGGATA GATGTCATTA
TCAAGTTGAG ATTTTCAAGG ACTTTATTAT CCATTTTATC CTATCAACGG CGAATGCAAA
TTACAAAACA ACACTAGTAG AAACAAAGCT GACTTGTTCA CATCTATTCT TGATTTATAC
TTCACAGTCG TGCTAGACTG TCAGAATCCT CGAACATTAT ACTAACAAAA TTCTAGGTCT
TGATTGATGG TCCAAAGATC CAAAGACAAG CCATTGCTTT GGCTAAGGTT GTCTTGACCC
CAATTGTTTT GCCAAACTTG CCAAGAGGTT CCAGAACTGC CACTGTCACC AAGAAGTGGG
CTGCTGCTGA AATCGACTCC AAGTGGGCTG CTACTTCTTG GGCTAAGAAG TTGGCTGCTA
GAGAAAGAAG ATCCCAATTG TCTGACTTCG AAAGATTCCA AGTGTTAGTC TTGAAGAAAC
AAAGAAGATT CGCTGTCAAG AAGGCTCTTG CCAAGGCTTA AACATTCTAA AAATCTACTG
ATCAAATCTT TTCATATCTT ATATGTGTGT ATTCTTAGTT TAATTAGTTT GAGGGTATCA
TAGTTAGGTT TTTTTAATGT TAACGTTCCA TAATTTTGTA TAGAAACAAA AATATCACAT
CCAAAAACTA T
|
|---|
| Protein sequence | MSTFSTVKAS NWRYVELGRV VLVNNKDLAT IVEIIDQKRV LIDGPKIQRQ AIALAKVVLT
PIVLPNLPRG SRTATVTKKW AAAEIDSKWA ATSWAKKLAA RERRSQLSDF ERFQVLVLKK
QRRFAVKKAL AKA
|
|---|
| |