| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68659 |
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| Symbol | LEU1 |
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| ID | 4851562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2143764 |
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| End bp | 2146171 |
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| Gene Length | 2408 bp |
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| Protein Length | 770 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640393270 |
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| Product | 3-isopropylmalate dehydratase |
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| Protein accession | XP_001388036 |
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| Protein GI | 126274863 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit
[COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit
[TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.161777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTACATATCT CGTTATTCTT AGCTTCAACA TTAAGAATGG CACCCAGAAC ATTATACGAC
AAGGTCTTTG AAGACCATAT TGTCCACAAG GACGAATCTG GATCGTATCT CTTATACATA
GACAGACATT TAGTTCACGA AGTGACATCT CCACAGGCTT TTGAAGGTTT GAAGAATGCT
GGAAGACCTG TCAGAAGAAC CGATTGTACT TTAGCAACTG TTGACCACAA TATCCCCACT
ATTTCTCGTG TCAACTTCAA GAACGTCAGT TCGTTCATAG ACCAGGACGA TTCAAGATTA
CAAGTGGAAA CCTTGGAACA GAACGTCAAG GACTTTGACG TGACCTATTT TGGCATGGAC
GATTCCAGAC AGGGTATTGT TCACATTGTC GGCCCAGAAC AAGGGTTCAC TTTGCCTGGT
ACCACAGTTG TTTGTGGTGA CTCTCACACT TCTACCCATG GTGCCTTCGG GGCTTTGGCT
TTCGGAATTG GTACCTCTGA AGTCGAGCAT GTCTTGGCAA CCCAGACGAT TATCCAGGCC
AAGTCTAAGA ACATGAGAAT CTCTGTAGAG GGTGATTTGT CCGAAGGAAT CACTTCTAAG
GACTTGGTCT TGCATGTCAT TGGTGTCATT GGTACTGCCG GTGGTACTGG TTGTGTCATC
GAGTTTGCTG GTAAGGCAAT TGAAAGTTTG TCAATGGAAG CCAGAATGTC CATCTGCAAC
ATGGCTATTG AAGCCGGAGC ACGTGCTGGT ATGATCAAGC CAGATCAGAC TACCTTTGAC
TACATCAGTG GTAGACCATT AGCTCCTAAG GGAGCTGAAT TAGAGAAAGC ATTGGCTTAC
TGGAAAACTT TGCATTCTGA TGAAGGTGCT CATTTTGATT ACGACATCAA GATCGCTGCT
TCAGATATCG TGCCTACAAT CACATGGGGT AACTCACCTC AGGATGCCCT CCCTATCACT
GCCAGTGTTC CAGACCCAGC ACATGTGACT GACCCTATCA AGAAATCAGG TATGGAAAGA
GCCTTGAAGT ACCAGGGCTT AACTCCTAAC ACCCGTTTGG TAGATATCAA GATTGACAAG
GCCTTTATTG GTTCGTGTAC TAACGCCCGT ATCGAGGACT TGAGAGCTGC TGCCAAGGTC
GCTAAGGGCC ACAAGAAGGC TGACAACGTC AAGTTGGTTC TTATCGTTCC TGGATCTGGA
TTGATCAAAG CCCAGGCTGA GAAGGAAGGT TTGGACAAGA TCTTTGAAGC TGCTGGTTTC
TCGTGGAGAG AAGCCGGTTG TTCGATGTGT CTTGGTATGA ACCCAGATAT TTTAGATCCT
GAAGAGAGAT GTGCTTCTAC GTCTAACAGA AACTTCGAGG GTCGTCAAGG TGCTCGTTCC
AGAACACATT TGATGTCTCC TGCCATGGCT GCTGCTGCTG CTATCAAAGG TCACTTCACT
GATATCCGTG AATTCGACTA CGATACATCT GATGAACCTG CTGTTCACAT TGAACACGAA
GTCGAAGACA AACTTCTCCA AGATGCTGTG TACGAACACG AAAAGGAAGT CATTGAAGAC
ACTCCAGGAA CAGAACAGGA AAGACTTTAT GACATTCCTA AGGAACCAGA ATCCAAGAAG
GCCAAGACTG CTGCTCCATC TGGAGGAATT GACAAGTTTG GTGTTCTCAC TGGTATTACT
GCTCCTTTGG ACAAAGCTAA CGTCGACACT GATGCTATCA TTCCTAAGCA GTTCTTGAAG
ACCATTAAGA GAACTGGTTT GAAGTCAGGT TTATTCTACG AAGCCAGATA CGTGAAGGAC
CCTGTAACTG GCAAAGACGT TGAAACAGAC TTTGTTTTGA ACGTAGAGCC ATACCGTAAG
GCTGAGATCT TGTTAGTCAC TGGTGACAAC TTTGGGTGTG GTTCTTCGAG AGAACACGCT
CCATGGGCTC TCAAGGACTT TGGTATCAAG TGTATGATTG CCCCATCCTT TGGTGATATC
TTCTACAATA ATTCGTTCAA GAACGGTTTG TTGCCCATTA GAATTCCTGC TGATGTGATT
CAATCCACTT TATATCCTGT CGTCACTGCT GGCCACAAAT TGACTATCGA CTTGCCTGCC
CAGCAAATTA GAGATGGAGA AACCGACGAA GTCTTGGTGG ACCACTTTGA CGTCGAAGAA
TTCAGAAAGC ATTGCTTAGT TAATGGTTTG GACGATATTG GCTTGACCTT ACAGAAGGAA
GAGTTCATCA GCAAGTACGA AGCTGTCAGA AGAGAGAAGT TCTCCTTCTT AGAAGGTGGC
TCCAAGTTAA TCAAGCCTAT CAAAGGTACC AAGAAGTCTA TCTATGGTGT CAAAGCACAA
GAATGGTGAT CCCATAACTA ATTATTTATG TCTTTAACGT AATCTATTTA ATACAAAACA
CATCAGTT
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| Protein sequence | MAPRTLYDKV FEDHIVHKDE SGSYLLYIDR HLVHEVTSPQ AFEGLKNAGR PVRRTDCTLA
TVDHNIPTIS RVNFKNVSSF IDQDDSRLQV ETLEQNVKDF DVTYFGMDDS RQGIVHIVGP
EQGFTLPGTT VVCGDSHTST HGAFGALAFG IGTSEVEHVL ATQTIIQAKS KNMRISVEGD
LSEGITSKDL VLHVIGVIGT AGGTGCVIEF AGKAIESLSM EARMSICNMA IEAGARAGMI
KPDQTTFDYI SGRPLAPKGA ELEKALAYWK TLHSDEGAHF DYDIKIAASD IVPTITWGNS
PQDALPITAS VPDPAHVTDP IKKSGMERAL KYQGLTPNTR LVDIKIDKAF IGSCTNARIE
DLRAAAKVAK GHKKADNVKL VLIVPGSGLI KAQAEKEGLD KIFEAAGFSW REAGCSMCLG
MNPDILDPEE RCASTSNRNF EGRQGARSRT HLMSPAMAAA AAIKGHFTDI REFDYDTSDE
PAVHIEHEVE DKLLQDAVYE HEKEVIEDTP GTEQERLYDI PKEPESKKAK TAAPSGGIDK
FGVLTGITAP LDKANVDTDA IIPKQFLKTI KRTGLKSGLF YEARYVKDPV TGKDVETDFV
LNVEPYRKAE ILLVTGDNFG CGSSREHAPW ALKDFGIKCM IAPSFGDIFY NNSFKNGLLP
IRIPADVIQS TLYPVVTAGH KLTIDLPAQQ IRDGETDEVL VDHFDVEEFR KHCLVNGLDD
IGLTLQKEEF ISKYEAVRRE KFSFLEGGSK LIKPIKGTKK SIYGVKAQEW
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